Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 MTND4P7-201ENST00000523876 130 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 PSMA2P1-201ENST00000526365 646 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AP004242.1-201ENST00000533701 349 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AC009994.1-201ENST00000606889 253 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AC034102.8-201ENST00000615146 484 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AL357559.1-201ENST00000622228 274 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AC112484.5-201ENST00000624189 228 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 RPS4XP5-202ENST00000449995 1334 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-283P-201ENST00000364788 107 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-767P-201ENST00000384132 107 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-190P-201ENST00000384154 102 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-1009P-201ENST00000390996 107 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 UBE2V1P2-201ENST00000397758 440 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 AL138878.1-201ENST00000405131 347 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 RPL21P65-201ENST00000406094 466 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 HMGB1P27-201ENST00000431429 603 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 VDAC1P3-201ENST00000434069 851 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 FABP5P13-201ENST00000452144 328 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 RPL21P99-201ENST00000480369 423 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 MTCO1P35-201ENST00000515270 228 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-507P-201ENST00000516045 100 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-123P-201ENST00000516163 102 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 Y_RNA.689-201ENST00000516589 107 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 MIR2116-201ENST00000517221 80 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 AC023050.3-201ENST00000541142 333 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 AL592436.1-201ENST00000605135 558 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 AC110741.2-201ENST00000605278 268 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 uc_338.34-201ENST00000617467 174 ntBASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCDHA3Q9Y5H8 OR4G2P-202ENST00000641004 1759 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 RNU4-66P-201ENST00000365199 138 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 U1.1-201ENST00000384101 164 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AL162578.1-201ENST00000406202 378 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AC009161.1-201ENST00000417306 376 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AL356867.1-201ENST00000429623 299 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 PRDX3P3-201ENST00000447765 522 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 MTND1P11-201ENST00000456661 876 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 RPL7P19-201ENST00000469948 618 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AL049874.1-201ENST00000489560 388 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AL138889.2-201ENST00000603883 242 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AL591034.3-201ENST00000605511 685 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AL390240.1-201ENST00000612950 384 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AC104985.2-201ENST00000620598 500 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 C2orf27A-204ENST00000623058 969 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AC068724.3-201ENST00000625906 87 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 AC100810.6-201ENST00000638068 285 ntBASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.94□□□□□ -1.78
PCDHA3Q9Y5H8 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-600P-201ENST00000362524 99 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-845P-201ENST00000362578 103 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 RNU6-213P-201ENST00000384051 104 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 RNA5SP424-201ENST00000390988 115 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 AL139397.2-201ENST00000404529 772 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 RPS12P24-201ENST00000412619 387 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 MTND4LP16-201ENST00000440828 295 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 RPS29P31-201ENST00000446147 164 ntBASIC3.93□□□□□ -1.78
PCDHA3Q9Y5H8 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms