Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC008481.1-201ENST00000463278 396 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC138853.1-201ENST00000503549 823 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC083906.5-201ENST00000503722 328 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC091826.1-201ENST00000514065 313 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 RNA5SP367-201ENST00000516557 118 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU6-201P-201ENST00000517100 61 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC100870.1-201ENST00000522035 505 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 ROCK1P1-201ENST00000573767 549 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 MIR3915-201ENST00000578518 97 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 MIR3945-201ENST00000581853 98 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC005498.1-201ENST00000592125 465 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 OR10AB1P-201ENST00000609613 938 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 AC110079.1-202ENST00000635213 138 ntBASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PCDHGA1Q9Y5H4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU6-193P-201ENST00000410977 107 ntBASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 RNA5SP31-201ENST00000411144 127 ntBASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL7P8-201ENST00000411964 730 ntBASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 Z99127.3-201ENST00000448158 395 ntBASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 EPS15P1-201ENST00000448836 336 ntBASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU6-390P-201ENST00000516259 103 ntBASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 SUB1P1-201ENST00000524415 382 ntBASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 AC005951.2-201ENST00000576282 495 ntBASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 AC013412.1-201ENST00000610687 192 ntBASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 AC097655.1-201ENST00000635075 318 ntBASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3□□□□□ -1.93
PCDHGA1Q9Y5H4 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU1-39P-201ENST00000383897 165 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU6-809P-201ENST00000384461 107 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RNU6-851P-201ENST00000384565 107 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AL445529.1-201ENST00000398713 389 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RNA5SP492-201ENST00000411330 114 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL21P24-201ENST00000413752 448 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 NDUFB4P5-201ENST00000415445 361 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL7P10-201ENST00000417407 739 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 USP9YP13-201ENST00000417797 480 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AL139413.1-201ENST00000421309 217 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC007919.1-201ENST00000429380 217 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 MTATP6P17-201ENST00000431030 672 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL23AP22-201ENST00000437556 453 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 CST9LP2-201ENST00000437612 320 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC093156.1-201ENST00000440382 670 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 MTND1P30-201ENST00000441241 901 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC118469.1-201ENST00000442943 488 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL32P28-201ENST00000443577 397 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 UBBP3-201ENST00000445497 241 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 GAPDHP27-201ENST00000447427 1020 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RPL37P6-201ENST00000460682 294 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC109486.1-201ENST00000486833 374 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 MIR2276-201ENST00000516886 89 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 RNA5SP380-201ENST00000517190 98 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC068657.1-201ENST00000520807 306 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 MTND4LP18-201ENST00000526864 291 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC007834.2-201ENST00000536310 343 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AL157394.1-201ENST00000562983 1224 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AL022161.1-201ENST00000604390 213 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AL035413.2-201ENST00000604801 525 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC019159.1-201ENST00000605094 187 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC092354.1-201ENST00000606057 376 ntBASIC2.99□□□□□ -1.93
PCDHGA1Q9Y5H4 AC107294.1-201ENST00000609524 467 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms