Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 MUC2-202ENST00000613187 4845 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 LINC01109-201ENST00000603837 3081 ntBASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCDHB11Q9Y5F2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 Y_RNA.170-201ENST00000363746 110 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 RNU4-9P-201ENST00000364951 139 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 RNY4P28-201ENST00000365281 93 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 RNA5SP187-201ENST00000384400 119 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 Y_RNA.504-201ENST00000384481 104 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 SNORA53-201ENST00000391141 249 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 RNA5SP241-201ENST00000391326 114 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 RPS6P12-201ENST00000432491 726 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 OR7H2P-201ENST00000513483 306 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 MIR4436B2-201ENST00000581415 91 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 MIR4436B1-201ENST00000583272 91 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 AC072026.1-201ENST00000605023 201 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 AC138965.3-201ENST00000623875 498 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 AC021753.1-201ENST00000635724 168 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 HAUS6P2-201ENST00000433254 2404 ntBASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PCDHB11Q9Y5F2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 AC023421.1-201ENST00000590535 1785 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 RNU6-1020P-201ENST00000363684 107 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 RNU6-336P-201ENST00000364891 107 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 RNY1P5-201ENST00000383890 115 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 RNU6-166P-201ENST00000384371 107 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 HSPA8P15-201ENST00000401676 786 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 EIF1P2-201ENST00000428233 350 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 RPL23AP24-201ENST00000458203 385 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 snoU13.30-201ENST00000458951 104 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 AC022133.1-201ENST00000490961 571 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 SNORA31.19-201ENST00000517079 126 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 RN7SL290P-201ENST00000578661 300 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 AC244107.2-201ENST00000611773 76 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 U4.7-201ENST00000638126 106 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 AL359854.1-201ENST00000614203 1594 ntBASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
PCDHB11Q9Y5F2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AL139811.1-201ENST00000424779 2299 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AL450326.2-201ENST00000421913 1962 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AC005005.4-201ENST00000623789 16698 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 RNU5E-7P-201ENST00000365290 117 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 RNU6-326P-201ENST00000365480 107 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 U3.36-201ENST00000408418 213 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 RPL7AP49-201ENST00000429522 581 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AL591438.1-201ENST00000433508 581 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 Z82188.1-201ENST00000436709 154 ntBASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.18□□□□□ -1.58
PCDHB11Q9Y5F2 RPS29P26-201ENST00000477483 171 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms