Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 Y_RNA.51-201ENST00000362725 102 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 SNORD113-6-201ENST00000363345 75 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 U3.12-201ENST00000364498 214 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 Y_RNA.548-201ENST00000384656 105 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AL139039.1-201ENST00000401900 692 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 RPLP0P7-201ENST00000416050 667 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AL096701.2-201ENST00000416920 238 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AL513477.1-202ENST00000417061 214 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 ELOCP9-201ENST00000418624 239 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 UBE2D3P4-201ENST00000441973 436 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 RPS3P1-201ENST00000456781 192 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC104563.1-201ENST00000476147 376 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 RNU6-150P-201ENST00000516237 95 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 RNU6-759P-201ENST00000516740 103 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 SNORA31.22-201ENST00000517204 135 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC068792.1-201ENST00000621354 417 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC079228.1-201ENST00000624774 1049 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC091965.5-201ENST00000624785 342 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 AC007671.2-201ENST00000637344 619 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 TPTE2P4-201ENST00000258589 1605 ntBASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
CLIP2Q9UDT6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 SNORD62.1-201ENST00000362541 86 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 SNORA25.6-201ENST00000364121 118 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 RSL24D1P4-201ENST00000400938 484 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 RNU4-72P-201ENST00000410754 173 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 MTCO1P21-201ENST00000416634 589 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 PPP1R11P2-201ENST00000423543 382 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 ZYG11AP1-201ENST00000430329 837 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC084290.1-201ENST00000434995 374 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 MTCO2P7-201ENST00000446518 666 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 MTND1P29-201ENST00000448112 647 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 SNRPGP6-201ENST00000451124 220 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 MTND1P9-201ENST00000453775 944 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 RNU7-125P-201ENST00000458760 62 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AL049714.1-201ENST00000466686 347 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 MTND3P7-201ENST00000474435 343 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 RPL31P60-201ENST00000478450 367 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 MTCO1P9-201ENST00000505577 1534 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC005832.2-201ENST00000538921 1430 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC008015.1-201ENST00000555505 465 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AL356575.1-201ENST00000603008 283 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC006270.3-201ENST00000605967 1036 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 BX664608.1-201ENST00000610519 487 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC011939.3-201ENST00000613686 466 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AL359693.1-201ENST00000614959 2407 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 AC005858.4-201ENST00000623191 700 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 MIR4275-201ENST00000636486 87 ntBASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CLIP2Q9UDT6 SDAD1P2-201ENST00000441308 2028 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 MAPK10-266ENST00000641066 6555 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AC104454.1-201ENST00000421341 1401 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 RNU4-24P-201ENST00000364565 139 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 SNORD116-9-201ENST00000384000 95 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 SNORD116-3-201ENST00000384287 95 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 SNORD116-7-201ENST00000384404 95 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 SNORD116-5-201ENST00000384462 95 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 RNU6-1197P-201ENST00000391183 107 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AL021407.1-201ENST00000404531 386 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 USP9YP20-201ENST00000419224 558 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 NDUFB4P7-201ENST00000423198 363 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AL593851.1-201ENST00000426171 157 ntBASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.05□□□□□ -1.92
CLIP2Q9UDT6 SNRPEP7-201ENST00000438350 220 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms