Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 MIR764-201ENST00000390811 85 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 CIR1P3-201ENST00000405137 479 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 RNU2-40P-201ENST00000410833 196 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 TOMM20P4-201ENST00000427861 435 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 Z80107.1-201ENST00000436830 412 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 THAP5P1-201ENST00000439089 262 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 DDX3P2-201ENST00000446138 111 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 FDX1P2-201ENST00000450769 375 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 SSXP1-201ENST00000453640 473 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 USP9YP34-201ENST00000453983 808 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC069528.1-202ENST00000482888 637 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 SNORA76.2-201ENST00000517095 137 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC124947.2-202ENST00000552735 133 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 AL391261.3-201ENST00000557194 520 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC087465.1-201ENST00000560574 245 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC025588.2-201ENST00000604851 466 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CISHQ9NSE2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.75□□□□□ -2.13
CISHQ9NSE2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CISHQ9NSE2 AC007785.2-201ENST00000598627 1916 ntBASIC1.75□□□□□ -2.13
CISHQ9NSE2 MTND4P23-201ENST00000447723 1363 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CISHQ9NSE2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CISHQ9NSE2 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 AL357078.2-201ENST00000416486 427 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC092634.6-201ENST00000418558 192 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 SUMO2P2-201ENST00000456482 255 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC092757.1-201ENST00000467293 467 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC114786.4-201ENST00000508771 728 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC117522.2-201ENST00000510049 657 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC114797.1-201ENST00000514003 728 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC084851.1-201ENST00000529105 249 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 MIR5571-201ENST00000577998 113 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 DUXAP10-204ENST00000612052 616 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC068057.2-201ENST00000624047 895 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 ZNF876P-202ENST00000398732 1485 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 AC005832.2-201ENST00000538921 1430 ntBASIC1.74□□□□□ -2.13
CISHQ9NSE2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
CISHQ9NSE2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CISHQ9NSE2 CENPCP1-201ENST00000533085 2578 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CISHQ9NSE2 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CISHQ9NSE2 UBE2L2-201ENST00000254302 429 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 RNA5SP190-201ENST00000365222 118 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 AL356131.1-201ENST00000405826 414 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 RN7SKP101-201ENST00000411376 320 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 AL136133.1-201ENST00000413694 376 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.73□□□□□ -2.13
CISHQ9NSE2 CYCSP48-201ENST00000417124 323 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 CCDC58P2-201ENST00000417131 366 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 HMGB1P49-201ENST00000418882 569 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.73□□□□□ -2.13
CISHQ9NSE2 RAC1P8-201ENST00000427086 527 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.73□□□□□ -2.13
CISHQ9NSE2 MTND3P4-201ENST00000453537 303 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 BOLA3P3-201ENST00000505182 232 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 RNU6-548P-201ENST00000517083 115 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
CISHQ9NSE2 AP002748.2-201ENST00000528671 348 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.73□□□□□ -2.13
CISHQ9NSE2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.73□□□□□ -2.13
CISHQ9NSE2 OR4K8P-201ENST00000578842 1048 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 HMGN2P15-201ENST00000585707 270 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 BNIP3P24-201ENST00000593398 557 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 AC040174.2-201ENST00000602701 465 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 AC080013.4-201ENST00000607624 649 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 MIR7843-201ENST00000622274 79 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 AC080188.3-201ENST00000624842 748 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 AL590396.4-201ENST00000636779 956 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.73□□□□□ -2.13
CISHQ9NSE2 AC006026.1-201ENST00000444025 1803 ntBASIC1.73□□□□□ -2.13
CISHQ9NSE2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
CISHQ9NSE2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CISHQ9NSE2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CISHQ9NSE2 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms