Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AC103710.1-201ENST00000610003 901 ntBASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 uc_338.20-201ENST00000621563 178 ntBASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AL031601.2-202ENST00000622650 282 ntBASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AC012640.5-201ENST00000623897 319 ntBASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 AC092881.1-201ENST00000638218 2733 ntBASIC1.85□□□□□ -2.11
UBQLN4Q9NRR5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AL356473.1-201ENST00000406203 1408 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 U8.2-201ENST00000363156 134 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 RNU1-39P-201ENST00000383897 165 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 Y_RNA.548-201ENST00000384656 105 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 RNU2-42P-201ENST00000410697 113 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AL356379.1-201ENST00000414105 126 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 FAM204CP-201ENST00000424489 642 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AC007560.1-201ENST00000426912 237 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 UBE2FP3-201ENST00000436366 524 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AC097493.1-201ENST00000463958 372 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 TRBV12-1-201ENST00000479785 344 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 RNA5SP364-201ENST00000516938 78 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AC002545.1-201ENST00000592511 181 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AC021749.1-201ENST00000604322 607 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AC005332.6-201ENST00000613178 446 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.84□□□□□ -2.11
UBQLN4Q9NRR5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.84□□□□□ -2.12
UBQLN4Q9NRR5 AC107982.1-201ENST00000507171 1300 ntBASIC1.84□□□□□ -2.12
UBQLN4Q9NRR5 KPNA2P1-201ENST00000458289 1591 ntBASIC1.84□□□□□ -2.12
UBQLN4Q9NRR5 AL359851.1-201ENST00000569460 4997 ntBASIC1.84□□□□□ -2.12
UBQLN4Q9NRR5 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AC005539.1-201ENST00000443768 1479 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 RNU6-609P-201ENST00000365459 107 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 RNU6-468P-201ENST00000384003 109 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 RNU6-207P-201ENST00000384137 107 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 SNORD65.1-201ENST00000390889 71 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 RPL23AP29-201ENST00000397284 453 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 RNA5SP338-201ENST00000410495 85 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 CYCSP48-201ENST00000417124 323 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 HMGB1P49-201ENST00000418882 569 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 MTCO1P3-201ENST00000429327 192 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 snoU13.8-201ENST00000458890 104 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 MTCO2P9-201ENST00000503214 694 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AC026414.1-201ENST00000504046 698 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 MIR514B-201ENST00000516774 80 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 HSPA8P13-201ENST00000523715 472 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AL138976.2-201ENST00000563989 694 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 MIR5708-201ENST00000579723 85 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 FTX_3.1-201ENST00000610451 147 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AC243773.3-201ENST00000613270 256 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AL157770.1-201ENST00000623049 439 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 AC104454.1-201ENST00000421341 1401 ntBASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
UBQLN4Q9NRR5 CENPCP1-201ENST00000533085 2578 ntBASIC1.82□□□□□ -2.12
UBQLN4Q9NRR5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
UBQLN4Q9NRR5 RNU6-216P-201ENST00000363282 104 ntBASIC1.82□□□□□ -2.12
UBQLN4Q9NRR5 RNU6-707P-201ENST00000364647 95 ntBASIC1.82□□□□□ -2.12
UBQLN4Q9NRR5 SNORA70B-201ENST00000384210 135 ntBASIC1.82□□□□□ -2.12
UBQLN4Q9NRR5 RNU6-253P-201ENST00000384730 105 ntBASIC1.82□□□□□ -2.12
UBQLN4Q9NRR5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
UBQLN4Q9NRR5 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.82□□□□□ -2.12
UBQLN4Q9NRR5 MTCO2P5-201ENST00000422621 426 ntBASIC1.82□□□□□ -2.12
UBQLN4Q9NRR5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms