Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AC002075.2-201ENST00000425207 252 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 RPS29P31-201ENST00000446147 164 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 U3.44-201ENST00000458938 192 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 RPL7P49-201ENST00000471402 708 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 HMGB3P15-201ENST00000507326 574 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 SNORA70.16-201ENST00000516390 95 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 NCAPGP2-201ENST00000557911 754 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AC027807.1-201ENST00000559921 996 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 MIR4738-201ENST00000579134 87 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AC106900.2-201ENST00000604994 317 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AC092954.2-201ENST00000609103 430 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AL390240.1-201ENST00000612950 384 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AC139792.3-201ENST00000623525 224 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AL160394.1-201ENST00000624765 724 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 AC005609.4-201ENST00000625071 447 ntBASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
MKKSQ9NPJ1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC005183.1-201ENST00000603687 1979 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 RPL7P26-201ENST00000333817 754 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 Y_RNA.372-201ENST00000365599 102 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 Y_RNA.409-201ENST00000383990 98 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 RNU6-701P-201ENST00000384059 107 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 RNU6-74P-201ENST00000384235 107 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 Y_RNA.481-201ENST00000384373 102 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 MIR34B-201ENST00000385076 84 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 MIR591-201ENST00000385290 95 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC068533.1-201ENST00000418542 415 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 USP9YP18-201ENST00000425912 695 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AL356867.1-201ENST00000429623 299 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 RPL36AP6-201ENST00000435770 321 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 UBE2V1P8-201ENST00000437166 265 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 HMGB3P12-201ENST00000438745 556 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC020550.1-201ENST00000447385 163 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 Z99127.3-201ENST00000448158 395 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC013267.1-201ENST00000458227 267 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC126389.1-201ENST00000477436 290 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC019235.1-201ENST00000503847 207 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 RN7SKP258-201ENST00000517151 304 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 RPS3AP4-201ENST00000555161 764 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 BNIP3P22-201ENST00000593399 556 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC006557.5-201ENST00000603126 811 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC025449.1-201ENST00000603896 529 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AL121992.2-201ENST00000606262 256 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC008536.2-201ENST00000607284 349 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 RNVU1-4-201ENST00000612985 164 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AC090517.2-201ENST00000614966 680 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 MIR7975-201ENST00000619350 68 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 AL589994.2-201ENST00000621124 579 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 OR4G2P-202ENST00000641004 1759 ntBASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
MKKSQ9NPJ1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
MKKSQ9NPJ1 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.28□□□□□ -1.88
MKKSQ9NPJ1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
MKKSQ9NPJ1 AC007256.1-201ENST00000392253 2765 ntBASIC3.28□□□□□ -1.88
MKKSQ9NPJ1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.28□□□□□ -1.88
MKKSQ9NPJ1 Y_RNA.9-201ENST00000362354 101 ntBASIC3.28□□□□□ -1.88
MKKSQ9NPJ1 RNU4-35P-201ENST00000362588 141 ntBASIC3.28□□□□□ -1.88
MKKSQ9NPJ1 SNORD46.1-201ENST00000364139 104 ntBASIC3.28□□□□□ -1.88
MKKSQ9NPJ1 RNU6-188P-201ENST00000364207 107 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms