Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.1□□□□□ -1.91
SIX2Q9NPC8 MIR92B-201ENST00000607575 96 ntBASIC3.1□□□□□ -1.91
SIX2Q9NPC8 AF250324.2-201ENST00000608299 610 ntBASIC3.1□□□□□ -1.91
SIX2Q9NPC8 AL158209.2-201ENST00000619266 216 ntBASIC3.1□□□□□ -1.91
SIX2Q9NPC8 AC124864.2-201ENST00000624736 186 ntBASIC3.1□□□□□ -1.91
SIX2Q9NPC8 SEPT14P19-203ENST00000633205 211 ntBASIC3.1□□□□□ -1.91
SIX2Q9NPC8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.1□□□□□ -1.91
SIX2Q9NPC8 AC096644.4-201ENST00000563417 2912 ntBASIC3.1□□□□□ -1.91
SIX2Q9NPC8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SIX2Q9NPC8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.1□□□□□ -1.91
SIX2Q9NPC8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.1□□□□□ -1.91
SIX2Q9NPC8 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SIX2Q9NPC8 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 OR4G2P-201ENST00000328113 903 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 RNU6-282P-201ENST00000365357 103 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 SNORA20.2-201ENST00000383922 131 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 RNU6-1103P-201ENST00000384150 107 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 RNU6-432P-201ENST00000384196 109 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 RPL17P50-201ENST00000396131 546 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 TOMM22P1-201ENST00000418578 312 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 SDCBPP3-201ENST00000419629 891 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 ARF4P2-201ENST00000430209 526 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 MTCO2P11-201ENST00000431069 680 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 NPM1P49-201ENST00000448027 714 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC135721.1-201ENST00000497954 479 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 HMGB1P22-201ENST00000505315 124 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC026801.2-201ENST00000515352 425 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 IGKV2-23-201ENST00000518729 323 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC022616.3-201ENST00000523940 148 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 DEFB108D-201ENST00000527787 222 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC093838.1-201ENST00000613014 469 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.09□□□□□ -1.91
SIX2Q9NPC8 U6atac.1-201ENST00000616025 117 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 U4.5-201ENST00000617137 123 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC006338.1-201ENST00000618453 749 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 AC010338.1-201ENST00000621823 717 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 LRRC77P-213ENST00000637727 880 ntBASIC3.09□□□□□ -1.91
SIX2Q9NPC8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
SIX2Q9NPC8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SIX2Q9NPC8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
SIX2Q9NPC8 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC092593.1-201ENST00000515413 1815 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 RPL9P7-201ENST00000330965 580 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 MIR422A-201ENST00000362286 90 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 RNU6-181P-201ENST00000363225 107 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 MIR512-1-201ENST00000384913 84 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 MIR181A1-201ENST00000385026 110 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 RNU6-328P-201ENST00000390887 106 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 RPS3AP24-201ENST00000407896 734 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 MIR548F1-201ENST00000408667 84 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 RNU2-43P-201ENST00000410306 190 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 MTCO3P12-201ENST00000416718 547 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 ELOCP4-201ENST00000420090 333 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 ISCA1P1-201ENST00000426679 387 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC132479.1-201ENST00000449160 144 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 PSPHP1-201ENST00000450062 261 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC003982.1-202ENST00000469928 248 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 RNA5SP76-201ENST00000516277 87 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 RNU6-445P-201ENST00000516949 107 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 SNORA31.20-201ENST00000517111 133 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 MTND4LP26-201ENST00000518144 282 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 FAM92A1P1-201ENST00000528023 890 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 MTCYBP41-201ENST00000528913 1123 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 ZNF519P2-201ENST00000557032 169 ntBASIC3.08□□□□□ -1.92
SIX2Q9NPC8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.08□□□□□ -1.92
SIX2Q9NPC8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms