Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC009097.3-201ENST00000563557 1018 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC136618.2-201ENST00000575091 400 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 MIR544B-201ENST00000582372 78 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 MIR3609-201ENST00000582661 80 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 BNIP3P23-201ENST00000599655 511 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AL391001.1-201ENST00000602747 715 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 ATP1B3P1-201ENST00000605365 821 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC007619.2-201ENST00000605743 379 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AC012150.2-201ENST00000621300 544 ntBASIC2.16□□□□□ -2.06
HMG20AQ9NP66 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
HMG20AQ9NP66 AL138713.1-201ENST00000624026 2130 ntBASIC2.15□□□□□ -2.06
HMG20AQ9NP66 MTND5P33-201ENST00000571250 1450 ntBASIC2.15□□□□□ -2.06
HMG20AQ9NP66 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
HMG20AQ9NP66 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 OR5J1P-201ENST00000313544 939 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 RNA5SP88-201ENST00000365560 109 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 U3.20-201ENST00000390909 217 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 UBE2FP1-201ENST00000416536 447 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 HMGB1P49-201ENST00000418882 569 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 FAM103A2P-201ENST00000444122 354 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 Z73417.1-201ENST00000447373 778 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 SNORD109B-201ENST00000458961 67 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 SNORD109A-201ENST00000459128 67 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 snoU13.22-201ENST00000459428 104 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 RPL23AP70-201ENST00000483361 460 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 GZMAP1-201ENST00000503054 631 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 AC022447.3-201ENST00000506865 495 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 AC034244.1-201ENST00000507687 207 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 SCARNA15.2-201ENST00000516409 127 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 AC068135.2-201ENST00000569293 1028 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 AC135507.2-201ENST00000612443 309 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 TUG1_2.1-201ENST00000614234 87 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 AP000553.5-201ENST00000641933 54 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.15□□□□□ -2.07
HMG20AQ9NP66 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
HMG20AQ9NP66 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AL596028.1-201ENST00000326971 197 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 RNU6-754P-201ENST00000391166 107 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 RN7SKP266-201ENST00000410232 287 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AL359704.1-201ENST00000411586 781 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 RPL22P18-201ENST00000417197 377 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AC099548.1-201ENST00000421443 426 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 COTL1P1-201ENST00000422309 375 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AL022400.1-201ENST00000423946 935 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 RPL7L1P10-201ENST00000427790 463 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 SRIP2-201ENST00000428470 166 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AL512844.2-201ENST00000433990 593 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 UBE2V1P13-201ENST00000436983 439 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 MTATP6P30-201ENST00000443540 664 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 DDX3P2-201ENST00000446138 111 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AP000936.2-201ENST00000447151 681 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 SNORD11.1-201ENST00000459482 85 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 RPS3AP14-201ENST00000483907 780 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 MRPL42P6-201ENST00000486397 371 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AC097462.2-201ENST00000504623 481 ntBASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.14□□□□□ -2.07
HMG20AQ9NP66 NRON-201ENST00000517270 370 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms