Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 Y_RNA.76-201ENST00000362931 109 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 RNU6-1290P-201ENST00000362957 109 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 U8.8-201ENST00000365399 135 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 RNU6-700P-201ENST00000391043 107 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AL109941.1-201ENST00000401925 229 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AL080315.1-201ENST00000406055 466 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AL513475.1-201ENST00000406602 315 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 RNU2-51P-201ENST00000410708 197 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 RPL21P90-201ENST00000415692 466 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AL159987.2-201ENST00000432754 307 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AL445433.1-201ENST00000457507 257 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AC097484.1-201ENST00000471148 389 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AC109925.1-201ENST00000478069 331 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AC010469.2-201ENST00000496412 480 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AC007016.1-201ENST00000512110 244 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 RNU6-352P-201ENST00000516908 107 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AC087369.1-201ENST00000520775 996 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 TRAV32-201ENST00000553993 340 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 Z83818.1-201ENST00000603584 150 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 MIR7155-201ENST00000615925 56 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AL031601.2-202ENST00000622650 282 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 DDX10P1-201ENST00000448545 1933 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 LINC02555-201ENST00000563933 1951 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 AC018529.3-201ENST00000624212 2254 ntBASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
NUCKS1Q9H1E3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AP001148.1-201ENST00000624124 2359 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 RNU6-858P-201ENST00000362436 107 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 Y_RNA.439-201ENST00000384119 94 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 RNU6-933P-201ENST00000384424 107 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 SNORA70.10-201ENST00000384515 134 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 RNU6-1117P-201ENST00000384525 104 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 RNU6-14P-201ENST00000384630 106 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 MIR708-201ENST00000390708 88 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 Y_RNA.581-201ENST00000391017 97 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 RPS15AP6-201ENST00000420703 385 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 MTND3P9-201ENST00000429526 346 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AC091286.1-201ENST00000431233 461 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 RPL7AP6-201ENST00000477943 801 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 FTH1P24-201ENST00000503502 462 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 NDUFB5P1-201ENST00000508134 564 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 RNA5SP228-201ENST00000516232 133 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AC093023.1-201ENST00000547375 507 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AC005951.2-201ENST00000576282 495 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AL365265.1-201ENST00000621045 234 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 AC090740.1-201ENST00000623193 2262 ntBASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.35□□□□□ -1.55
NUCKS1Q9H1E3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AC007529.1-201ENST00000418574 2178 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 SNURFL-201ENST00000309296 343 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 RNU1-94P-201ENST00000362627 173 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 RNU6-178P-201ENST00000384631 104 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AL645927.1-201ENST00000396783 406 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AC004866.2-201ENST00000438285 481 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 GEMIN8P3-201ENST00000445417 720 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 IGHV5-78-201ENST00000450948 295 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 RPL7AP28-201ENST00000464513 571 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 AC093270.2-201ENST00000486157 792 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 MTND3P25-201ENST00000509243 135 ntBASIC5.34□□□□□ -1.55
NUCKS1Q9H1E3 IGKV2-38-201ENST00000517443 247 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms