Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU6-582P-201ENST00000362989 107 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 SNORD65C-201ENST00000390962 71 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AL035405.1-201ENST00000400795 710 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 RNU2-47P-201ENST00000410649 186 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 RNA5SP489-201ENST00000410986 109 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AC008173.1-201ENST00000418901 264 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 PIGFP3-201ENST00000441918 722 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 SUMO2P2-201ENST00000456482 255 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AC090515.1-201ENST00000465295 476 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 CYCSP26-201ENST00000534107 320 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 NIFKP8-201ENST00000560500 874 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AL592148.2-201ENST00000612210 372 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AC009090.3-201ENST00000616553 565 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AC106730.3-201ENST00000624568 641 ntBASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
UPF3BQ9BZI7 AC007785.2-201ENST00000598627 1916 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 MIR489-201ENST00000384923 84 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 HMGB1P49-201ENST00000418882 569 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 AC007560.1-201ENST00000426912 237 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 PSMA6P3-201ENST00000428242 164 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 AC092473.1-201ENST00000441098 221 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 TRGVB-201ENST00000453257 471 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 USP9YP34-201ENST00000453983 808 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 AC147055.4-201ENST00000504399 745 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 FAM92A1P2-202ENST00000504766 877 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 TRMT112P2-201ENST00000512910 132 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 SNORA48.10-201ENST00000516965 160 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 AL355877.2-201ENST00000603670 358 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 AL161729.4-201ENST00000604650 476 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 VN1R74P-201ENST00000613259 503 ntBASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.23□□□□□ -2.05
UPF3BQ9BZI7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AP002784.2-201ENST00000397300 549 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 RNU2-40P-201ENST00000410833 196 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 UBE2FP3-201ENST00000436366 524 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 RNFT1P2-201ENST00000443064 757 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC007182.2-201ENST00000489251 402 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 RN7SL274P-201ENST00000492268 272 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC114786.4-201ENST00000508771 728 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC114797.1-201ENST00000514003 728 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC118942.1-201ENST00000529674 1035 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.6-201ENST00000603753 252 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.11-201ENST00000604059 253 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.10-201ENST00000604330 253 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC008162.1-201ENST00000604718 254 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.1-201ENST00000604752 252 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.2-201ENST00000604983 252 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.5-201ENST00000605253 252 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.4-201ENST00000605279 254 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.12-201ENST00000605291 253 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.8-201ENST00000605353 252 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.9-201ENST00000605428 253 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL670379.7-201ENST00000605823 252 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC080013.4-201ENST00000607624 649 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AC006213.4-201ENST00000616184 634 ntBASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.22□□□□□ -2.05
UPF3BQ9BZI7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 DDX10P1-201ENST00000448545 1933 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 RNU5A-1-201ENST00000362698 116 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 USP12PX-201ENST00000432383 1057 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 ARF4P4-201ENST00000439608 520 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 AC109471.1-201ENST00000511631 612 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 AC022447.1-201ENST00000515358 464 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 AC124947.2-202ENST00000552735 133 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 MTCYBP27-201ENST00000555160 670 ntBASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.21□□□□□ -2.06
UPF3BQ9BZI7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms