Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 BNIP3P9-201ENST00000603714 553 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 AC022893.3-201ENST00000607665 437 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 AC034102.8-201ENST00000615146 484 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 uc_338.11-201ENST00000619132 160 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.47□□□□□ -1.85
NPAS1Q99742 MIR3662-201ENST00000637030 95 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 U6.98-201ENST00000637157 84 ntBASIC3.47□□□□□ -1.85
NPAS1Q99742 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS1Q99742 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NPAS1Q99742 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS1Q99742 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.47□□□□□ -1.85
NPAS1Q99742 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NPAS1Q99742 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NPAS1Q99742 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NPAS1Q99742 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPAS1Q99742 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
NPAS1Q99742 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPAS1Q99742 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NPAS1Q99742 AC116096.1-201ENST00000566804 2314 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
NPAS1Q99742 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
NPAS1Q99742 RNA5SP97-201ENST00000365006 84 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 U8.11-201ENST00000384699 133 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 U8.12-201ENST00000384701 133 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 PTMAP5-201ENST00000393073 333 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 CISD1P1-201ENST00000393907 327 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AL606923.1-201ENST00000406616 190 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.46□□□□□ -1.86
NPAS1Q99742 RNU6-1068P-201ENST00000410958 103 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 OR6C66P-201ENST00000414917 930 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.46□□□□□ -1.86
NPAS1Q99742 MTND4LP11-201ENST00000422184 280 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC092017.2-201ENST00000427600 362 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AL445584.1-201ENST00000431451 330 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.46□□□□□ -1.86
NPAS1Q99742 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.46□□□□□ -1.86
NPAS1Q99742 HMGN2P16-201ENST00000456802 261 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 U8.18-201ENST00000459285 133 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 RPL21P11-201ENST00000461458 483 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 RPL21P8-201ENST00000465083 535 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 SNRPGP3-201ENST00000469405 227 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 TRBV1-201ENST00000476502 284 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC084198.1-201ENST00000477747 402 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.46□□□□□ -1.86
NPAS1Q99742 AL160314.1-201ENST00000490836 438 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.46□□□□□ -1.86
NPAS1Q99742 AC026784.1-201ENST00000507986 352 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 TTC39CP1-201ENST00000512513 755 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.46□□□□□ -1.86
NPAS1Q99742 RNA5SP290-201ENST00000517133 127 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.46□□□□□ -1.86
NPAS1Q99742 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.46□□□□□ -1.86
NPAS1Q99742 SYF2P1-201ENST00000550658 413 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.46□□□□□ -1.86
NPAS1Q99742 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.46□□□□□ -1.86
NPAS1Q99742 MIR4703-201ENST00000577728 79 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 MIR5685-201ENST00000579080 79 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC008521.1-201ENST00000587471 187 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AL138889.2-201ENST00000603883 242 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC107294.1-201ENST00000609524 467 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 DISC2.1-201ENST00000612827 205 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 AC024940.5-201ENST00000622889 474 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 MTND5P42-201ENST00000637720 498 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 IPO8P1-201ENST00000455509 3109 ntBASIC3.46□□□□□ -1.86
NPAS1Q99742 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.46□□□□□ -1.86
NPAS1Q99742 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.86
NPAS1Q99742 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS1Q99742 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS1Q99742 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS1Q99742 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS1Q99742 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.45□□□□□ -1.86
NPAS1Q99742 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS1Q99742 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS1Q99742 RNU6-1167P-201ENST00000363227 94 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 Y_RNA.245-201ENST00000364493 95 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 RNU6-534P-201ENST00000364877 106 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 RNU6-14P-201ENST00000384630 106 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 MIR325-201ENST00000385260 98 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AL590704.1-201ENST00000402856 794 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AL109913.1-201ENST00000421173 514 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.45□□□□□ -1.86
NPAS1Q99742 DPPA3P1-201ENST00000448050 469 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 AC073415.1-201ENST00000449240 153 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.45□□□□□ -1.86
NPAS1Q99742 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AC087588.1-201ENST00000462203 316 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 KC877373.1-201ENST00000479066 408 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 RPL39P36-201ENST00000490784 156 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 AC092436.1-201ENST00000506450 503 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 HMGB3P15-201ENST00000507326 574 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
NPAS1Q99742 PCBP2P3-201ENST00000509726 843 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 RNU6-835P-201ENST00000516974 104 ntBASIC3.45□□□□□ -1.86
NPAS1Q99742 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.45□□□□□ -1.86
NPAS1Q99742 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms