Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AL359273.1-201ENST00000510918 627 ntBASIC3.21□□□□□ -1.9
RAD9AQ99638 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.21□□□□□ -1.9
RAD9AQ99638 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
RAD9AQ99638 AC022878.1-201ENST00000530684 149 ntBASIC3.21□□□□□ -1.9
RAD9AQ99638 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.21□□□□□ -1.9
RAD9AQ99638 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.21□□□□□ -1.9
RAD9AQ99638 AL845331.3-202ENST00000562856 261 ntBASIC3.21□□□□□ -1.9
RAD9AQ99638 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.21□□□□□ -1.9
RAD9AQ99638 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.21□□□□□ -1.9
RAD9AQ99638 CYCSP39-201ENST00000565821 309 ntBASIC3.21□□□□□ -1.9
RAD9AQ99638 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.21□□□□□ -1.9
RAD9AQ99638 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.21□□□□□ -1.9
RAD9AQ99638 AC119751.7-201ENST00000600494 245 ntBASIC3.21□□□□□ -1.9
RAD9AQ99638 AC138749.5-201ENST00000611461 208 ntBASIC3.21□□□□□ -1.9
RAD9AQ99638 AC116165.2-201ENST00000616705 206 ntBASIC3.21□□□□□ -1.9
RAD9AQ99638 AC009878.1-201ENST00000621819 340 ntBASIC3.21□□□□□ -1.9
RAD9AQ99638 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAD9AQ99638 AC096644.4-201ENST00000563417 2912 ntBASIC3.21□□□□□ -1.9
RAD9AQ99638 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAD9AQ99638 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.21□□□□□ -1.9
RAD9AQ99638 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RAD9AQ99638 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAD9AQ99638 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
RAD9AQ99638 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAD9AQ99638 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAD9AQ99638 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RAD9AQ99638 SNORA14A-201ENST00000364773 135 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAD9AQ99638 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RAD9AQ99638 RNA5SP38-201ENST00000410750 119 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 RNA5SP508-201ENST00000411327 119 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.2□□□□□ -1.9
RAD9AQ99638 AL353777.1-201ENST00000425552 326 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.2□□□□□ -1.9
RAD9AQ99638 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.2□□□□□ -1.9
RAD9AQ99638 ST13P20-201ENST00000447996 1065 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 EEF1B2P7-201ENST00000451177 676 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 HSPE1P6-201ENST00000479457 291 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AC010424.1-201ENST00000506336 297 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.2□□□□□ -1.9
RAD9AQ99638 SNORA70.16-201ENST00000516390 95 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AC022616.6-201ENST00000520479 119 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.2□□□□□ -1.9
RAD9AQ99638 AC123904.2-201ENST00000548059 300 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AC055876.1-202ENST00000567053 138 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AL356432.3-201ENST00000568952 465 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.2□□□□□ -1.9
RAD9AQ99638 AL359999.1-201ENST00000604513 294 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AC106900.2-201ENST00000604994 317 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 RN7SKP299-201ENST00000606679 301 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.2□□□□□ -1.9
RAD9AQ99638 AC245008.1-201ENST00000608123 476 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AC073476.4-201ENST00000628409 72 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RAD9AQ99638 CUL1P1-201ENST00000509510 2425 ntBASIC3.2□□□□□ -1.9
RAD9AQ99638 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RAD9AQ99638 AL390237.1-201ENST00000404226 1415 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAD9AQ99638 Y_RNA.51-201ENST00000362725 102 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 MTND1P29-201ENST00000448112 647 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 RNU6-956P-201ENST00000458868 103 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 RNU7-59P-201ENST00000459101 61 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AC126389.1-201ENST00000477436 290 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 RPL30P14-201ENST00000482744 348 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 MTCO3P28-201ENST00000513351 515 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AP000857.1-201ENST00000532151 543 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AP000873.5-201ENST00000533906 236 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AC091544.4-201ENST00000555268 342 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AL133153.1-201ENST00000557756 303 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.19□□□□□ -1.9
RAD9AQ99638 BNIP3P8-201ENST00000597863 560 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AC007038.2-201ENST00000608095 740 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AC004832.5-201ENST00000608677 401 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AC009570.1-201ENST00000609599 745 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.19□□□□□ -1.9
RAD9AQ99638 MIR6076-201ENST00000617521 113 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AC092140.2-201ENST00000618027 521 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AL603758.1-201ENST00000618654 241 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 AL603839.4-201ENST00000624658 1005 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.19□□□□□ -1.9
RAD9AQ99638 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RAD9AQ99638 SDAD1P2-201ENST00000441308 2028 ntBASIC3.19□□□□□ -1.9
RAD9AQ99638 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.19□□□□□ -1.9
RAD9AQ99638 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAD9AQ99638 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAD9AQ99638 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAD9AQ99638 MIR148B-201ENST00000362252 99 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 RNU5A-1-201ENST00000362698 116 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 SNORD56.3-201ENST00000363507 71 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 CD24P4-201ENST00000382840 243 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 Y_RNA.553-201ENST00000384670 102 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AL109755.1-201ENST00000401791 649 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 FCF1P10-201ENST00000407590 479 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 HMGN1P14-201ENST00000412459 517 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.18□□□□□ -1.9
RAD9AQ99638 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.18□□□□□ -1.9
RAD9AQ99638 AC010153.1-201ENST00000432862 727 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 AL162389.1-201ENST00000449233 177 ntBASIC3.18□□□□□ -1.9
RAD9AQ99638 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms