Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 PPBPP1-201ENST00000510807 373 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC018797.3-201ENST00000513388 1241 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU6-1143P-201ENST00000516125 104 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC009812.2-201ENST00000517657 457 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 RPL21P12-201ENST00000559810 515 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 CYP4A43P-201ENST00000568156 121 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC025627.2-201ENST00000576220 160 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AL020997.2-201ENST00000602607 184 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AL451044.1-201ENST00000604867 238 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AC107871.2-201ENST00000612894 502 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AL355365.1-201ENST00000616480 294 ntBASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
CDK5RAP1Q96SZ6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 SNORD74.4-201ENST00000364129 80 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.212-201ENST00000364177 102 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.234-201ENST00000364409 97 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.404-201ENST00000383978 102 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.455-201ENST00000384230 98 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.482-201ENST00000384377 111 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU4-6P-201ENST00000410804 122 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 RAC1P3-201ENST00000416129 580 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AC137499.1-201ENST00000427602 88 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 MTND5P27-201ENST00000428871 1720 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AL590233.1-201ENST00000430017 456 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 ARL5AP4-201ENST00000430731 512 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 MTND1P17-201ENST00000448961 204 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AC004801.2-202ENST00000463559 283 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 RN7SL585P-201ENST00000470538 280 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AP000926.1-201ENST00000479573 241 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 RPL21P93-201ENST00000480465 489 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AC006517.1-201ENST00000480485 328 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AC116562.3-201ENST00000506136 177 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.668-201ENST00000516233 93 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 RNU7-143P-201ENST00000516781 65 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 RNA5SP503-201ENST00000517047 117 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 IGLV3-26-201ENST00000520756 302 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AC068587.5-201ENST00000528506 175 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AC091516.1-201ENST00000549191 703 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 RPL23AP87-202ENST00000573039 466 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AC053481.3-201ENST00000577881 843 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AC004825.2-201ENST00000616634 455 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AC011155.2-201ENST00000623202 216 ntBASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.25□□□□□ -1.73
CDK5RAP1Q96SZ6 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC107081.3-201ENST00000612715 2034 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 SNORD35B-201ENST00000363660 87 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 U3.15-201ENST00000365398 212 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 SNORA75B-201ENST00000384053 137 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 DSTNP4-201ENST00000399472 474 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 OR6C66P-201ENST00000414917 930 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC068533.1-201ENST00000418542 415 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 HMGN3P1-201ENST00000453847 193 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 RN7SL132P-201ENST00000478131 296 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 Y_RNA.654-201ENST00000497848 106 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 HMGB3P17-201ENST00000504195 649 ntBASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.24□□□□□ -1.73
CDK5RAP1Q96SZ6 TXNP6-201ENST00000510190 310 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms