Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC130324.3-201ENST00000614165 542 ntBASIC1.35□□□□□ -2.19
HMCN1Q96RW7 AC120349.2-201ENST00000625002 298 ntBASIC1.35□□□□□ -2.19
HMCN1Q96RW7 BMS1P21-201ENST00000634565 365 ntBASIC1.35□□□□□ -2.19
HMCN1Q96RW7 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
HMCN1Q96RW7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
HMCN1Q96RW7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HMCN1Q96RW7 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
HMCN1Q96RW7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
HMCN1Q96RW7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
HMCN1Q96RW7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HMCN1Q96RW7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
HMCN1Q96RW7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
HMCN1Q96RW7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
HMCN1Q96RW7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AP003122.5-201ENST00000527668 3766 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.418-201ENST00000384029 102 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.450-201ENST00000384198 113 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 ENSAP1-201ENST00000392855 326 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 PPP1R11P2-201ENST00000423543 382 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC012498.1-201ENST00000424037 437 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 MTATP8P2-201ENST00000435212 202 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AL445193.1-201ENST00000441183 141 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 RPS20P22-201ENST00000473700 357 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC021146.3-201ENST00000511911 260 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.666-201ENST00000516187 112 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 RNU6-971P-201ENST00000516920 106 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC022616.6-201ENST00000520479 119 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC020661.2-201ENST00000560114 134 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 uc_338.7-201ENST00000621834 124 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 MYO5B-201ENST00000285039 9505 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 MON2-214ENST00000641654 10382 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 RNU6-661P-201ENST00000362409 107 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.265-201ENST00000364677 108 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.269-201ENST00000364685 89 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 RNU6-1134P-201ENST00000365156 101 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 Y_RNA.525-201ENST00000384570 113 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 RNU6-1190P-201ENST00000410811 104 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC068533.2-201ENST00000411872 306 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 YWHAZP8-201ENST00000436935 731 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AL357520.1-201ENST00000441557 453 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 PPBPP1-201ENST00000510807 373 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 RNU6-1114P-201ENST00000516022 107 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 OSBPL9P2-201ENST00000526582 1228 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC005951.2-201ENST00000576282 495 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC009994.1-201ENST00000606889 253 ntBASIC1.34□□□□□ -2.19
HMCN1Q96RW7 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
HMCN1Q96RW7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms