Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 SNORA3.3-201ENST00000408712 125 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 RNU6-1304P-201ENST00000411374 106 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC087650.1-201ENST00000431445 468 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 HMGB1P37-201ENST00000439613 609 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC093156.1-201ENST00000440382 670 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 RPL7P12-201ENST00000446719 750 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 U3.44-201ENST00000458938 192 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 MRPS17P3-201ENST00000465453 385 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 HMGN1P10-201ENST00000474557 553 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 RN7SL271P-201ENST00000487601 295 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 TMEM248P1-201ENST00000510579 951 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 RNU6-277P-201ENST00000516272 106 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 SNORD27.1-201ENST00000516319 72 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 SCARNA15.1-201ENST00000516384 125 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC105029.1-201ENST00000520250 669 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 CR383656.7-201ENST00000548164 174 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 SYF2P1-201ENST00000550658 413 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC126177.3-201ENST00000551839 688 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 SETP7-201ENST00000552169 453 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 RPL21P12-201ENST00000559810 515 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC026464.5-201ENST00000562497 722 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC024619.4-201ENST00000580924 316 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC243960.4-201ENST00000600532 288 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 CTHRC1P1-201ENST00000605383 469 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 RNU6-89P-201ENST00000606519 100 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 RMST_7.1-201ENST00000621935 268 ntBASIC2.97□□□□□ -1.93
DUX3Q96PT4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
DUX3Q96PT4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
DUX3Q96PT4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
DUX3Q96PT4 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.97□□□□□ -1.93
DUX3Q96PT4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
DUX3Q96PT4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
DUX3Q96PT4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
DUX3Q96PT4 RNU6-600P-201ENST00000362524 99 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 SNORA71.3-201ENST00000362582 128 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 RNA5SP322-201ENST00000363617 119 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 RNU4-76P-201ENST00000364509 141 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 RNU6-278P-201ENST00000390945 109 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 SNORD37.1-201ENST00000390968 65 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 RNU6-903P-201ENST00000391270 109 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 RNA5SP56-201ENST00000410277 118 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 HMGN1P24-201ENST00000412282 298 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 UBE2FP1-201ENST00000416536 447 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 OR2AS1P-201ENST00000427827 319 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC079781.2-201ENST00000446424 169 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC020550.1-201ENST00000447385 163 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 GAPDHP27-201ENST00000447427 1020 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AL358232.1-201ENST00000448030 501 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC010655.1-201ENST00000449336 292 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC233279.1-201ENST00000455300 423 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AL590639.1-201ENST00000456484 337 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 GMFBP1-201ENST00000467831 427 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 VN1R17P-201ENST00000472048 1090 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 RNU6-1231P-201ENST00000517185 103 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC008489.1-201ENST00000524271 483 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 MIR3690-201ENST00000580266 75 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC024220.1-201ENST00000603675 484 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC010591.1-201ENST00000603941 649 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC011155.2-201ENST00000623202 216 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 SNORA50A-202ENST00000629536 136 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 AL034408.1-202ENST00000636088 415 ntBASIC2.96□□□□□ -1.94
DUX3Q96PT4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
DUX3Q96PT4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
DUX3Q96PT4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms