Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 U6atac.1-201ENST00000616025 117 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 U4.5-201ENST00000617137 123 ntBASIC3.92□□□□□ -1.78
SNX27Q96L92 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX27Q96L92 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX27Q96L92 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX27Q96L92 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX27Q96L92 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX27Q96L92 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SNX27Q96L92 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
SNX27Q96L92 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX27Q96L92 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX27Q96L92 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
SNX27Q96L92 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.91□□□□□ -1.78
SNX27Q96L92 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX27Q96L92 HSPE1P11-201ENST00000339579 310 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX27Q96L92 RNU5A-1-201ENST00000362698 116 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 RNU6-1097P-201ENST00000363586 107 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 RNU6-108P-201ENST00000365558 107 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX27Q96L92 AL359634.1-202ENST00000404721 284 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.91□□□□□ -1.78
SNX27Q96L92 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX27Q96L92 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX27Q96L92 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX27Q96L92 MTCO3P30-201ENST00000426425 670 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 ISCA1P1-201ENST00000426679 387 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 AC008850.1-201ENST00000427546 362 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 OR2AS1P-201ENST00000427827 319 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.91□□□□□ -1.78
SNX27Q96L92 SNORD97-201ENST00000459187 142 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 AC126182.1-201ENST00000478134 357 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 HSPE1P6-201ENST00000479457 291 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 TRBV12-1-201ENST00000479785 344 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX27Q96L92 RNU6-410P-201ENST00000517006 107 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX27Q96L92 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.91□□□□□ -1.78
SNX27Q96L92 AP003072.2-201ENST00000527756 676 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX27Q96L92 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX27Q96L92 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX27Q96L92 AC073657.2-201ENST00000605661 303 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 AL162274.2-201ENST00000614406 332 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 SDR42E1P2-201ENST00000614861 481 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 AC010133.1-201ENST00000615809 842 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX27Q96L92 AL359880.1-201ENST00000621879 266 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 FRG1KP-201ENST00000623592 341 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 AC009161.2-201ENST00000624626 138 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.91□□□□□ -1.78
SNX27Q96L92 AC244205.2-202ENST00000635781 342 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 U6.98-201ENST00000637157 84 ntBASIC3.91□□□□□ -1.78
SNX27Q96L92 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX27Q96L92 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX27Q96L92 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX27Q96L92 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SNX27Q96L92 AL133383.2-201ENST00000622958 2336 ntBASIC3.9□□□□□ -1.78
SNX27Q96L92 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.9□□□□□ -1.78
SNX27Q96L92 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX27Q96L92 DEFB108F-201ENST00000344638 222 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 RNU5E-6P-201ENST00000365574 115 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
SNX27Q96L92 Y_RNA.409-201ENST00000383990 98 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 SNORA36C-201ENST00000384289 132 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 Y_RNA.554-201ENST00000384672 102 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 HMGN2P8-201ENST00000391458 268 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 CALM2P3-201ENST00000400429 449 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 HSPE1P8-201ENST00000406997 288 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 MTHFD2P2-201ENST00000407725 247 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.9□□□□□ -1.79
SNX27Q96L92 EIF1P1-201ENST00000421436 341 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX27Q96L92 MTCO2P19-201ENST00000427513 598 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 TIMM9P3-201ENST00000428659 274 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX27Q96L92 MTATP6P13-201ENST00000438531 667 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX27Q96L92 AC079781.2-201ENST00000446424 169 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 GAPDHP27-201ENST00000447427 1020 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AC245517.4-201ENST00000448601 281 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX27Q96L92 RPL21P10-201ENST00000463521 490 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AC008155.2-201ENST00000464337 397 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 RPL23AP14-201ENST00000468281 468 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AC023598.1-201ENST00000472521 361 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AC078785.3-201ENST00000476607 425 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AC009646.1-201ENST00000510455 318 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX27Q96L92 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.9□□□□□ -1.79
SNX27Q96L92 AP001893.2-201ENST00000526949 202 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 OR11H5P-201ENST00000554039 926 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 MIR3690-201ENST00000580266 75 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX27Q96L92 AC012507.3-201ENST00000603556 477 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AP002360.4-201ENST00000606980 481 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AC092954.2-201ENST00000609103 430 ntBASIC3.9□□□□□ -1.79
SNX27Q96L92 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX27Q96L92 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.9□□□□□ -1.79
SNX27Q96L92 AL160394.1-201ENST00000624765 724 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms