Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 snoU13.24-201ENST00000458998 104 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 GMFBP1-201ENST00000467831 427 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 RPS27AP1-201ENST00000475545 471 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 MTCYBP18-201ENST00000501056 747 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 AP005435.4-201ENST00000529514 284 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 OR5BN1P-201ENST00000532955 829 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 HSPE1P5-201ENST00000561489 272 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC034105.4-201ENST00000568304 277 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC006130.2-201ENST00000586202 326 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 DPPA3P3-201ENST00000603842 430 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC245389.1-201ENST00000605141 529 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 BRDTP1-201ENST00000605735 677 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 AC005344.1-201ENST00000613391 459 ntBASIC3.74□□□□□ -1.81
VPS50Q96JG6 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS50Q96JG6 AP004289.2-201ENST00000444413 1457 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS50Q96JG6 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS50Q96JG6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 Y_RNA.86-201ENST00000363020 111 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 RNU6-61P-201ENST00000365528 109 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 RNU6-1029P-201ENST00000384109 107 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AL136116.1-201ENST00000403591 381 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 NDUFS5P1-201ENST00000405668 289 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 RPS15AP6-201ENST00000420703 385 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 RPL31P12-201ENST00000422587 358 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AL139247.1-201ENST00000422768 325 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 MTND5P20-201ENST00000448677 143 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 MTND3P10-201ENST00000450967 341 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 RPS20P20-201ENST00000460498 340 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 EIF4EP3-201ENST00000498782 656 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC008628.2-201ENST00000502605 298 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 MTCO2P30-201ENST00000503662 364 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 SLC25A15P5-201ENST00000508033 253 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC025465.4-201ENST00000513422 638 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 RN7SKP219-201ENST00000516825 296 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 RNU1-45P-201ENST00000517191 141 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC010525.2-201ENST00000590920 195 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 NRBF2P5-201ENST00000603087 788 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC008739.3-201ENST00000603262 127 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 BNIP3P9-201ENST00000603714 553 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AL357078.3-201ENST00000607528 618 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 DISC2.1-201ENST00000612827 205 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC011155.2-201ENST00000623202 216 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC025034.2-201ENST00000623264 286 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 CEP170P1-201ENST00000502249 4587 ntBASIC3.73□□□□□ -1.81
VPS50Q96JG6 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS50Q96JG6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS50Q96JG6 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS50Q96JG6 AC004925.1-201ENST00000624256 2706 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS50Q96JG6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS50Q96JG6 AL354685.2-201ENST00000448218 1447 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC007256.1-201ENST00000392253 2765 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 NACAP2-201ENST00000318548 624 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 SNORD115-7-201ENST00000365306 82 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AL359837.1-201ENST00000381357 287 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 RNU6-213P-201ENST00000384051 104 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 SNORA36C-201ENST00000384289 132 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 SOD2P1-201ENST00000396543 562 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 HSPE1P8-201ENST00000406997 288 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 USP12PX-201ENST00000432383 1057 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 RPL36AP53-201ENST00000432891 316 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 MTND4P25-201ENST00000441039 533 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 AL121871.1-201ENST00000443413 436 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS50Q96JG6 RNU7-182P-201ENST00000459009 62 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 SNORA84-201ENST00000459229 133 ntBASIC3.72□□□□□ -1.81
VPS50Q96JG6 MLLT10P2-201ENST00000506434 249 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms