Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.97□□□□□ -1.93
VMP1Q96GC9 AC010329.5-201ENST00000623497 2174 ntBASIC2.97□□□□□ -1.93
VMP1Q96GC9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
VMP1Q96GC9 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VMP1Q96GC9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 RNU6-1083P-201ENST00000384022 107 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 AC104389.3-201ENST00000445629 235 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 SNORD11.1-201ENST00000459482 85 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 TRBV1-201ENST00000476502 284 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 RPS3AP43-201ENST00000479743 781 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 AC020699.1-201ENST00000505161 445 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 RNA5SP76-201ENST00000516277 87 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 MTND2P32-201ENST00000521584 1038 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 AL356432.3-201ENST00000568952 465 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 AC024619.4-201ENST00000580924 316 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 AC024153.1-201ENST00000603103 365 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 AL031667.3-201ENST00000620124 655 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 AP002791.1-201ENST00000623291 381 ntBASIC2.96□□□□□ -1.94
VMP1Q96GC9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
VMP1Q96GC9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VMP1Q96GC9 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VMP1Q96GC9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VMP1Q96GC9 RNA5SP393-201ENST00000363423 117 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 RNU6-701P-201ENST00000384059 107 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 RSL24D1P4-201ENST00000400938 484 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 AL353729.1-201ENST00000425044 720 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 AL354941.1-201ENST00000438600 464 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC026801.1-201ENST00000497178 464 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 AP002404.1-201ENST00000532005 451 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC021739.1-201ENST00000559631 174 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC013244.3-201ENST00000605614 388 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC107952.2-201ENST00000606048 486 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC092953.2-201ENST00000608000 699 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC107214.2-201ENST00000608204 634 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC018692.3-201ENST00000623929 123 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 AC091903.1-201ENST00000624322 454 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 ADAM3A-203ENST00000461344 2157 ntBASIC2.95□□□□□ -1.94
VMP1Q96GC9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
VMP1Q96GC9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VMP1Q96GC9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VMP1Q96GC9 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VMP1Q96GC9 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 Y_RNA.46-201ENST00000362695 102 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 SNORD113-6-201ENST00000363345 75 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 SNORA7.4-201ENST00000384249 137 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 MIR483-201ENST00000385070 76 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 ANAPC10P1-201ENST00000395991 556 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AL139095.1-201ENST00000404326 391 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 RNU6-1328P-201ENST00000410938 106 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 ELOCP17-201ENST00000414751 326 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 RPL36AP6-201ENST00000435770 321 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 RPS24P13-201ENST00000442520 397 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC016696.1-201ENST00000446949 318 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 MTATP6P7-201ENST00000453315 681 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 MTCO1P42-201ENST00000457379 726 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 NDUFB4P2-201ENST00000509515 391 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 RNU1-104P-201ENST00000517280 175 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 AP006587.4-201ENST00000526053 529 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AP001004.1-201ENST00000582468 324 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 AL391813.1-201ENST00000603098 260 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VMP1Q96GC9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.94□□□□□ -1.94
VMP1Q96GC9 AL589743.7-201ENST00000612637 233 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC068787.1-201ENST00000623908 691 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC026422.1-201ENST00000623961 452 ntBASIC2.94□□□□□ -1.94
VMP1Q96GC9 AC080128.1-201ENST00000474389 1917 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms