Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.04□□□□□ -2.08
TOPBP1Q92547 AC099654.7-201ENST00000635788 2127 ntBASIC2.04□□□□□ -2.08
TOPBP1Q92547 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.03□□□□□ -2.08
TOPBP1Q92547 RNU6-441P-201ENST00000384545 106 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 RNU6-882P-201ENST00000391025 103 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 HMGN2P30-201ENST00000423237 256 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.03□□□□□ -2.08
TOPBP1Q92547 AC005534.2-201ENST00000431047 433 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.03□□□□□ -2.08
TOPBP1Q92547 RAB11AP1-201ENST00000442978 646 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.03□□□□□ -2.08
TOPBP1Q92547 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.03□□□□□ -2.08
TOPBP1Q92547 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.03□□□□□ -2.08
TOPBP1Q92547 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.03□□□□□ -2.08
TOPBP1Q92547 AC010928.2-201ENST00000588017 287 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 NUTF2P8-201ENST00000604593 363 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 AC106900.2-201ENST00000604994 317 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 AC021851.1-201ENST00000608537 1082 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 MIR203B-201ENST00000636080 86 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 AC083865.1-201ENST00000636634 831 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 MTND2P41-201ENST00000637599 773 ntBASIC2.03□□□□□ -2.08
TOPBP1Q92547 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.03□□□□□ -2.08
TOPBP1Q92547 RNU6-989P-201ENST00000362756 107 ntBASIC2.02□□□□□ -2.09
TOPBP1Q92547 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.02□□□□□ -2.09
TOPBP1Q92547 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.02□□□□□ -2.09
TOPBP1Q92547 SNRPFP3-201ENST00000457792 225 ntBASIC2.02□□□□□ -2.09
TOPBP1Q92547 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.02□□□□□ -2.09
TOPBP1Q92547 AL121821.2-201ENST00000556081 394 ntBASIC2.02□□□□□ -2.09
TOPBP1Q92547 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
TOPBP1Q92547 MIR5000-201ENST00000577717 103 ntBASIC2.02□□□□□ -2.09
TOPBP1Q92547 AC025588.3-201ENST00000604182 274 ntBASIC2.02□□□□□ -2.09
TOPBP1Q92547 AL133507.1-201ENST00000605269 557 ntBASIC2.02□□□□□ -2.09
TOPBP1Q92547 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.02□□□□□ -2.09
TOPBP1Q92547 AL360181.4-201ENST00000621752 134 ntBASIC2.02□□□□□ -2.09
TOPBP1Q92547 AL590396.2-201ENST00000636511 1041 ntBASIC2.02□□□□□ -2.09
TOPBP1Q92547 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
TOPBP1Q92547 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.02□□□□□ -2.09
TOPBP1Q92547 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 RNU6-339P-201ENST00000384310 107 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TOPBP1Q92547 AC092447.6-201ENST00000414578 210 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 RPL30P14-201ENST00000482744 348 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 AC096751.1-202ENST00000502691 1067 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 RNA5SP476-201ENST00000516613 103 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 OR4R1P-201ENST00000529879 463 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 RN7SL793P-201ENST00000583259 296 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 MIR6840-201ENST00000611937 71 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 AC090116.1-201ENST00000615679 446 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 AC009032.1-201ENST00000617574 431 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 AC097372.4-201ENST00000625025 466 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 ENSAP3-201ENST00000312710 333 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 RNU6-37P-201ENST00000362692 107 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 RNU6-11P-201ENST00000364234 107 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 RNU4-91P-201ENST00000364778 135 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 SNORA1.3-201ENST00000384676 136 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 RNU6-1151P-201ENST00000384684 107 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 AL022400.1-201ENST00000423946 935 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 HMGN3P1-201ENST00000453847 193 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 OR9N1P-202ENST00000494289 481 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 GLYCAM1-201ENST00000546596 285 ntBASIC2.01□□□□□ -2.09
TOPBP1Q92547 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.01□□□□□ -2.09
TOPBP1Q92547 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2□□□□□ -2.09
TOPBP1Q92547 AC130650.2-201ENST00000618736 2403 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 AC135776.4-201ENST00000624300 1904 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 RNU6-1339P-201ENST00000363574 91 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 RNA5SP139-201ENST00000364340 117 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 RNU6-1074P-201ENST00000383995 104 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 RNU6-40P-201ENST00000384254 107 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 RNA5SP252-201ENST00000391131 119 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 TAF9BP2-201ENST00000400856 499 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 RNU6-712P-201ENST00000410558 100 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 MTND5P25-201ENST00000430499 799 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 AL591704.1-201ENST00000432574 275 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 MTND1P33-201ENST00000446251 917 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2□□□□□ -2.09
TOPBP1Q92547 AC015724.1-201ENST00000478577 156 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 AC023790.1-201ENST00000482174 347 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 AC006499.2-201ENST00000513470 337 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 RNU6-202P-201ENST00000515998 96 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2□□□□□ -2.09
TOPBP1Q92547 AC009127.3-201ENST00000570531 403 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 AC106028.5-201ENST00000610332 395 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 AP003400.6-201ENST00000624698 740 ntBASIC2□□□□□ -2.09
TOPBP1Q92547 Y_RNA.68-201ENST00000362881 102 ntBASIC1.99□□□□□ -2.09
TOPBP1Q92547 SNORA67.1-201ENST00000364749 141 ntBASIC1.99□□□□□ -2.09
TOPBP1Q92547 RNU1-133P-201ENST00000364867 167 ntBASIC1.99□□□□□ -2.09
TOPBP1Q92547 RPS4XP3-201ENST00000398541 413 ntBASIC1.99□□□□□ -2.09
TOPBP1Q92547 AL030996.1-201ENST00000411430 235 ntBASIC1.99□□□□□ -2.09
TOPBP1Q92547 HMGB3P31-201ENST00000413333 595 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms