Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC007014.2-201ENST00000615581 479 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 uc_338.12-201ENST00000616344 181 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC006338.1-201ENST00000618453 749 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 AC244517.1-201ENST00000606030 2086 ntBASIC3.16□□□□□ -1.9
TM9SF4Q92544 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TM9SF4Q92544 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.16□□□□□ -1.9
TM9SF4Q92544 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TM9SF4Q92544 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TM9SF4Q92544 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
TM9SF4Q92544 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TM9SF4Q92544 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.15□□□□□ -1.9
TM9SF4Q92544 OR1S2-201ENST00000302592 978 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 RNU6-1155P-201ENST00000363554 107 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC068050.1-201ENST00000394891 380 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 RNU2-8P-201ENST00000410727 190 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 BX323014.1-201ENST00000412876 237 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 RPL23AP30-201ENST00000432419 501 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC002486.1-201ENST00000435098 391 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 MTCO2P3-201ENST00000442543 421 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC125238.1-201ENST00000448842 249 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC092185.1-201ENST00000491371 97 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TM9SF4Q92544 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC010265.1-201ENST00000513509 211 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 RNU6-1095P-201ENST00000516148 108 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 Y_RNA.704-201ENST00000516851 102 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 IGKV2-26-201ENST00000518305 343 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC004024.1-201ENST00000549244 247 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 SUB1P2-201ENST00000556401 297 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 MIR4325-201ENST00000583049 90 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 AL031176.1-201ENST00000604554 466 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC103710.2-201ENST00000609912 942 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC135507.2-201ENST00000612443 309 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 MIR7112-201ENST00000616126 65 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC073534.2-201ENST00000620377 381 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 AL353748.2-201ENST00000622148 471 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 AC110801.1-201ENST00000623590 212 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 AL136313.1-201ENST00000624804 202 ntBASIC3.15□□□□□ -1.91
TM9SF4Q92544 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM9SF4Q92544 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM9SF4Q92544 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TM9SF4Q92544 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
TM9SF4Q92544 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 MTND5P27-201ENST00000428871 1720 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 Y_RNA.381-201ENST00000365666 102 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 RNU6-629P-201ENST00000384061 103 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 Y_RNA.450-201ENST00000384198 113 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 RNU6-39P-201ENST00000384344 107 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 MIR128-1-201ENST00000384921 82 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 SNORA48.2-201ENST00000390926 124 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 SNORA48.5-201ENST00000391143 135 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AL590002.1-201ENST00000406554 418 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 SNORA11.2-201ENST00000408318 127 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 RNU4-47P-201ENST00000410876 114 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 ELOCP4-201ENST00000420090 333 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TM9SF4Q92544 MTND1P2-201ENST00000430604 821 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 RPS27P29-201ENST00000463110 252 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 RPL23AP67-201ENST00000465341 474 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 RPL27AP5-201ENST00000469428 449 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC092989.1-201ENST00000481235 277 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC007182.2-201ENST00000489251 402 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 FAM92A1P2-202ENST00000504766 877 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC105914.1-201ENST00000511798 226 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC114797.1-201ENST00000514003 728 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 SCARNA24.1-201ENST00000516465 137 ntBASIC3.14□□□□□ -1.91
TM9SF4Q92544 AC090572.1-201ENST00000519251 160 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms