Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RNU1-89P-201ENST00000384592 164 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 Z85995.1-201ENST00000415547 335 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 MRPL50P2-201ENST00000416821 482 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 UBE2D3P2-201ENST00000424409 445 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AL606489.2-201ENST00000433886 234 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AF228730.2-201ENST00000438784 848 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 RPS20P22-201ENST00000473700 357 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 RNU2-27P-201ENST00000516185 142 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 MIR2114-201ENST00000516645 80 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 RN7SKP60-201ENST00000516985 239 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 SYF2P1-201ENST00000550658 413 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 ZNF192P1-203ENST00000565888 810 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC025678.1-201ENST00000567861 338 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AP001094.1-201ENST00000579805 193 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC002545.1-201ENST00000592511 181 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC174048.1-201ENST00000603389 144 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC104763.2-201ENST00000604179 382 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC013553.2-201ENST00000604244 589 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC007621.1-201ENST00000604544 437 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC006077.1-201ENST00000604746 343 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 HMGB1P50-201ENST00000605814 607 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 AC093788.1-201ENST00000609356 927 ntBASIC3.61□□□□□ -1.83
HMGB4Q8WW32 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HMGB4Q8WW32 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 RNU6-179P-201ENST00000363350 107 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 RNA5SP322-201ENST00000363617 119 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 RNY4P14-201ENST00000363656 96 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 SNORA38.1-201ENST00000364172 131 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 SNORA62.1-201ENST00000364287 154 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 RNU6-61P-201ENST00000365528 109 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 SNORD115-47-201ENST00000391226 86 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 HLFP1-201ENST00000402375 499 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 BTF3P7-201ENST00000407097 488 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC017083.1-201ENST00000428093 483 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC005019.1-201ENST00000436455 431 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 RPL7P54-201ENST00000438336 674 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 BNIP3P2-201ENST00000441221 577 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 CBWD4P-201ENST00000445695 655 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 FGF7P6-202ENST00000451282 293 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 RBMY2UP-201ENST00000453474 324 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 HMGN2P7-201ENST00000456186 273 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 RNU6-420P-201ENST00000458780 107 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 RNU7-182P-201ENST00000459009 62 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC087588.1-201ENST00000462203 316 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC083798.1-201ENST00000472671 131 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC108078.2-201ENST00000510750 236 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 Y_RNA.704-201ENST00000516851 102 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 MIR4775-201ENST00000581168 75 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC034102.8-201ENST00000615146 484 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AP001486.3-201ENST00000615334 372 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC025034.2-201ENST00000623264 286 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC093908.1-201ENST00000623125 8092 ntBASIC3.6□□□□□ -1.83
HMGB4Q8WW32 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
HMGB4Q8WW32 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 AC006504.1-201ENST00000562493 3666 ntBASIC3.59□□□□□ -1.83
HMGB4Q8WW32 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HMGB4Q8WW32 Y_RNA.402-201ENST00000383972 102 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms