Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC012065.2-201ENST00000421295 375 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 MTCYBP8-201ENST00000422855 651 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AC008065.1-201ENST00000428525 348 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 SAR1AP4-201ENST00000429225 591 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 GPR143P-201ENST00000434155 205 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 RNU7-63P-201ENST00000459054 62 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AP001992.1-205ENST00000462248 379 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AC034222.1-201ENST00000494052 532 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 MTCO3P44-201ENST00000510977 541 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AC021146.1-201ENST00000511202 716 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 TTC39CP1-201ENST00000512513 755 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 HIGD1AP3-201ENST00000515857 278 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AP006245.1-201ENST00000522549 120 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AC022790.1-201ENST00000522872 204 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AP003072.2-201ENST00000527756 676 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 PTP4A1P6-201ENST00000531034 478 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 AC093249.1-201ENST00000567049 203 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 AL353997.4-201ENST00000586196 166 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AP001029.3-201ENST00000588063 596 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 AC007566.2-201ENST00000603642 413 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.3□□□□□ -1.72
SYNE4Q8N205 AL359893.1-201ENST00000447628 1580 ntBASIC4.3□□□□□ -1.72
SYNE4Q8N205 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SYNE4Q8N205 ZNF807-201ENST00000328088 1707 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SYNE4Q8N205 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SYNE4Q8N205 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SYNE4Q8N205 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC097714.1-201ENST00000511272 1647 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SYNE4Q8N205 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SYNE4Q8N205 RNU6-28P-201ENST00000362378 107 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 RNU6-474P-201ENST00000384243 107 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SYNE4Q8N205 TXNP7-201ENST00000406296 293 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC127526.1-201ENST00000417526 366 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC119618.1-201ENST00000434191 222 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 IFNA20P-201ENST00000436840 528 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 HMGB1P18-201ENST00000438801 619 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 FGF7P3-201ENST00000454645 303 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC104563.1-201ENST00000476147 376 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.29□□□□□ -1.72
SYNE4Q8N205 SRP72-202ENST00000504757 745 ntTSL 2 BASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC005798.1-201ENST00000513715 387 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 Vault.1-201ENST00000516474 102 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 IGKV2D-36-201ENST00000518643 226 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.29□□□□□ -1.72
SYNE4Q8N205 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC008489.1-201ENST00000524271 483 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC068446.3-201ENST00000555285 382 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.29□□□□□ -1.72
SYNE4Q8N205 HMGB3P26-201ENST00000560051 582 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 AC026464.5-201ENST00000562497 722 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 HMGB1P6-201ENST00000569046 646 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 MIR3671-201ENST00000580455 88 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 AL713922.2-201ENST00000619384 716 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SYNE4Q8N205 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SYNE4Q8N205 MTCO1P9-201ENST00000505577 1534 ntBASIC4.29□□□□□ -1.72
SYNE4Q8N205 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.29□□□□□ -1.72
SYNE4Q8N205 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SYNE4Q8N205 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SYNE4Q8N205 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 ASNSP3-201ENST00000451989 1306 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 RNA5SP432-201ENST00000362480 116 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 Y_RNA.255-201ENST00000364581 97 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 RNU6-39P-201ENST00000384344 107 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 Y_RNA.579-201ENST00000390939 94 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AL356421.1-201ENST00000403255 413 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AL357075.1-201ENST00000404107 726 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC018630.2-202ENST00000422992 927 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 DUTP6-201ENST00000425573 462 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC006028.1-201ENST00000438379 402 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 BRK1P2-201ENST00000442875 223 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC073415.1-201ENST00000449240 153 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AL162388.1-201ENST00000450912 352 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 RNU6-329P-201ENST00000459618 107 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 MRPS17P3-201ENST00000465453 385 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 RPS26P3-201ENST00000470205 348 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC078785.3-201ENST00000476607 425 ntBASIC4.28□□□□□ -1.72
SYNE4Q8N205 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.28□□□□□ -1.72
SYNE4Q8N205 AC004057.1-201ENST00000485827 348 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms