Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL136164.3-201ENST00000624429 3978 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 AC000123.3-201ENST00000624029 4975 ntBASIC5.01□□□□□ -1.61
NPAS4Q8IUM7 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NPAS4Q8IUM7 OR51H2P-202ENST00000641424 3046 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5□□□□□ -1.61
NPAS4Q8IUM7 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5□□□□□ -1.61
NPAS4Q8IUM7 RNU6-238P-201ENST00000363313 106 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 RNU6-379P-201ENST00000363813 104 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 Y_RNA.364-201ENST00000365532 101 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5□□□□□ -1.61
NPAS4Q8IUM7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5□□□□□ -1.61
NPAS4Q8IUM7 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5□□□□□ -1.61
NPAS4Q8IUM7 RPL35AP21-201ENST00000437667 333 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 RANP8-201ENST00000444720 713 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5□□□□□ -1.61
NPAS4Q8IUM7 CYCSP34-201ENST00000458172 304 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5□□□□□ -1.61
NPAS4Q8IUM7 RN7SL810P-201ENST00000493031 276 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 AC107222.1-201ENST00000510899 637 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 Y_RNA.661-201ENST00000516003 99 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 RNU6-635P-201ENST00000516651 102 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 AC005868.1-201ENST00000536421 331 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 ZNF192P1-203ENST00000565888 810 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 BNIP3P16-201ENST00000589779 534 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 AL512605.2-201ENST00000592972 256 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 AC006157.1-201ENST00000611750 366 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 AC098657.3-201ENST00000620434 263 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 AL669831.3-213ENST00000636676 183 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5□□□□□ -1.61
NPAS4Q8IUM7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5□□□□□ -1.61
NPAS4Q8IUM7 AC006971.1-201ENST00000407916 4486 ntBASIC5□□□□□ -1.61
NPAS4Q8IUM7 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5□□□□□ -1.61
NPAS4Q8IUM7 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
NPAS4Q8IUM7 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 FAM35BP-202ENST00000497389 3337 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 Z95331.1-201ENST00000623075 23112 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 MFSD8-242ENST00000641690 4199 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 SNORD3E-201ENST00000362899 217 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 Y_RNA.324-201ENST00000365165 102 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 MIR659-201ENST00000384963 97 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 RNU6-1197P-201ENST00000391183 107 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 U3.35-201ENST00000408405 208 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 RNU2-3P-201ENST00000410144 191 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 RNU2-68P-201ENST00000410878 191 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC007738.1-201ENST00000413892 348 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AL354766.1-201ENST00000423396 542 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 VTI1BP4-201ENST00000427516 527 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 HMGB1P9-201ENST00000429856 646 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 RPS29P17-201ENST00000430795 166 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC011998.1-201ENST00000433403 117 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AL645568.3-201ENST00000433683 316 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 MTND2P29-201ENST00000438595 412 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 RPL21P13-201ENST00000488305 481 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC022493.1-201ENST00000492984 337 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 RPL30P5-201ENST00000494923 336 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 Y_RNA.708-201ENST00000516950 96 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 RNU6-388P-201ENST00000517012 105 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 RNU6-389P-201ENST00000517048 105 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AP005902.1-201ENST00000521358 186 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 TRAV37-201ENST00000553906 342 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC074050.1-201ENST00000563247 211 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC093591.2-201ENST00000565254 3843 ntBASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NPAS4Q8IUM7 AC008079.2-201ENST00000623543 20396 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 SNORD62.1-201ENST00000362541 86 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 RNA5SP515-201ENST00000364570 118 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 Y_RNA.463-201ENST00000384271 102 ntBASIC4.98□□□□□ -1.61
NPAS4Q8IUM7 Y_RNA.574-201ENST00000384766 95 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms