Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 RPS4XP3-201ENST00000398541 413 ntBASIC0.78□□□□□ -2.29
CSMD3Q7Z407 RPL7P27-201ENST00000403775 720 ntBASIC0.78□□□□□ -2.29
CSMD3Q7Z407 TATDN1P1-201ENST00000414123 891 ntBASIC0.78□□□□□ -2.29
CSMD3Q7Z407 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.78□□□□□ -2.29
CSMD3Q7Z407 PMCHL2-203ENST00000457791 237 ntBASIC0.78□□□□□ -2.29
CSMD3Q7Z407 AC097493.1-201ENST00000463958 372 ntBASIC0.78□□□□□ -2.29
CSMD3Q7Z407 RPS15AP34-201ENST00000487776 387 ntBASIC0.78□□□□□ -2.29
CSMD3Q7Z407 LRRC34P2-201ENST00000514850 553 ntBASIC0.78□□□□□ -2.29
CSMD3Q7Z407 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.78□□□□□ -2.29
CSMD3Q7Z407 AC091932.3-201ENST00000624223 323 ntBASIC0.78□□□□□ -2.29
CSMD3Q7Z407 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 RNA5SP465-201ENST00000391195 109 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AL030996.1-201ENST00000411430 235 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 PSPHP1-201ENST00000450062 261 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC105036.1-201ENST00000566222 271 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC021755.4-201ENST00000616620 456 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 RMST_5.1-201ENST00000618704 126 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC018755.4-201ENST00000619715 454 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 RNU6-600P-201ENST00000362524 99 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC004022.2-201ENST00000413824 193 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 HMGB1P49-201ENST00000418882 569 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 RPS15AP40-201ENST00000419621 391 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AL031663.1-201ENST00000437445 219 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC107032.1-201ENST00000485945 480 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 DEFB108E-201ENST00000524692 240 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC023824.2-201ENST00000566185 400 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 MIR4714-201ENST00000580728 77 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 MIR5194-201ENST00000582634 120 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AL133507.1-201ENST00000605269 557 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 CCT4P2-201ENST00000233836 1548 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC103710.2-202ENST00000641454 2853 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 RNA5SP391-201ENST00000363456 119 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 MIR150-201ENST00000385048 84 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 SNRPEP10-201ENST00000420249 274 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 ARF4P4-201ENST00000439608 520 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC234775.1-201ENST00000454247 670 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 HSPE1P20-201ENST00000538133 289 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 NOP56P3-201ENST00000549457 385 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 MIR548Y-201ENST00000582739 110 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC005498.1-201ENST00000592125 465 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 AC005332.10-201ENST00000612725 619 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.77□□□□□ -2.29
CSMD3Q7Z407 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 RPL21P66-201ENST00000426566 466 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 RPL30P4-201ENST00000429309 333 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 IPO7P1-201ENST00000442031 636 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 RBM43P1-201ENST00000476891 1081 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 MRPS17P9-201ENST00000511924 393 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 EEF1B2P4-201ENST00000551398 348 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AL161734.1-201ENST00000609720 557 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AC007342.9-201ENST00000623877 1385 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AC016769.3-201ENST00000396562 315 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 RNU4-72P-201ENST00000410754 173 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 NAP1L1P3-201ENST00000462291 880 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 RPL30P6-201ENST00000475925 342 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AC103833.1-201ENST00000517442 172 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 TPTE2P4-201ENST00000258589 1605 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 MIR532-201ENST00000385025 91 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AL596276.1-201ENST00000434465 418 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AC234064.1-201ENST00000436312 247 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 HMGB1P46-201ENST00000520062 610 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 CBX3P7-201ENST00000532876 502 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AC135178.6-201ENST00000605314 398 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 AL138880.2-201ENST00000616214 239 ntBASIC0.76□□□□□ -2.29
CSMD3Q7Z407 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
CSMD3Q7Z407 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CSMD3Q7Z407 RPL31P63-201ENST00000422565 375 ntBASIC0.75□□□□□ -2.29
CSMD3Q7Z407 AP000949.1-201ENST00000438328 629 ntBASIC0.75□□□□□ -2.29
CSMD3Q7Z407 RNF2P1-201ENST00000442955 1010 ntBASIC0.75□□□□□ -2.29
CSMD3Q7Z407 Z77249.1-201ENST00000444622 1175 ntBASIC0.75□□□□□ -2.29
CSMD3Q7Z407 MTCO2P9-201ENST00000503214 694 ntBASIC0.75□□□□□ -2.29
CSMD3Q7Z407 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.75□□□□□ -2.29
CSMD3Q7Z407 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.75□□□□□ -2.29
CSMD3Q7Z407 MIR4295-201ENST00000585286 85 ntBASIC0.75□□□□□ -2.29
CSMD3Q7Z407 AL355812.1-201ENST00000603215 216 ntBASIC0.75□□□□□ -2.29
CSMD3Q7Z407 AC113368.1-201ENST00000603736 382 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms