Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 AL133153.1-201ENST00000557756 303 ntBASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 AC107304.1-201ENST00000604229 296 ntBASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 AC136475.10-201ENST00000620253 385 ntBASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 C2orf27A-204ENST00000623058 969 ntBASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 AC019226.1-201ENST00000625666 515 ntBASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 OR5H6-203ENST00000642105 978 ntBASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 AC004925.1-201ENST00000624256 2706 ntBASIC4.09□□□□□ -1.75
KRT28Q7Z3Y7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.09□□□□□ -1.76
KRT28Q7Z3Y7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 RNU6-851P-201ENST00000384565 107 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 RNU2-43P-201ENST00000410306 190 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 UBE2V1P10-201ENST00000414685 269 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AL159169.1-201ENST00000421119 127 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AC007283.2-201ENST00000424739 197 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AL451074.3-201ENST00000437709 472 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AC079448.1-201ENST00000449377 373 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AL359385.1-201ENST00000456509 365 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 RNA5SP337-201ENST00000517007 109 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 SNORA31.20-201ENST00000517111 133 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AC005832.2-201ENST00000538921 1430 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AL845331.3-202ENST00000562856 261 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AC136619.2-201ENST00000563361 631 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AC087481.2-201ENST00000565492 330 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 AC092794.1-201ENST00000612734 582 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 uc_338.12-201ENST00000616344 181 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KRT28Q7Z3Y7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 RNU6-1181P-201ENST00000384191 106 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 RNU6-754P-201ENST00000391166 107 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 RNU4-65P-201ENST00000410473 140 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 RNU2-52P-201ENST00000410680 190 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AC002075.2-201ENST00000425207 252 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AC133104.1-201ENST00000429100 218 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AC087499.2-201ENST00000432861 149 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AL121890.1-201ENST00000435457 205 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 USP9YP7-201ENST00000436723 430 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 HMGN2P21-201ENST00000447764 270 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 NPM1P49-201ENST00000448027 714 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 USP9YP32-201ENST00000452432 430 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 MTND1P12-201ENST00000455231 147 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 C1DP4-201ENST00000455429 424 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 MTCO2P29-201ENST00000465212 189 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 TRBV12-1-201ENST00000479785 344 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 MLLT10P2-201ENST00000506434 249 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AC108078.1-201ENST00000508073 725 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AC021146.1-201ENST00000511202 716 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 OR5G4P-201ENST00000525251 760 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AC125611.2-201ENST00000551907 647 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AC012182.1-201ENST00000570133 895 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AL022099.1-201ENST00000604551 712 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AP000860.1-201ENST00000605250 559 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AL034351.1-201ENST00000605288 668 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AL592295.2-201ENST00000612578 206 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 U6atac.1-201ENST00000616025 117 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 AC244205.2-202ENST00000635781 342 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 MIR6863-201ENST00000636112 90 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 DDX10P1-201ENST00000448545 1933 ntBASIC4.07□□□□□ -1.76
KRT28Q7Z3Y7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 MIR30E-201ENST00000362104 92 ntBASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 MIR423-201ENST00000362201 94 ntBASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 RNU6-223P-201ENST00000362830 107 ntBASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 RNA5SP508-201ENST00000411327 119 ntBASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 UBE2FP1-201ENST00000416536 447 ntBASIC4.06□□□□□ -1.76
KRT28Q7Z3Y7 EI24P1-201ENST00000416584 867 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms