Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 RNU4-24P-201ENST00000364565 139 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AL512633.1-201ENST00000399931 655 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 BX682237.1-201ENST00000415016 335 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 HMGN2P30-201ENST00000423237 256 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.57□□□□□ -2
ZNF544Q6NX49 MTND1P28-201ENST00000435623 950 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.57□□□□□ -2
ZNF544Q6NX49 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AL360221.1-201ENST00000445989 335 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.57□□□□□ -2
ZNF544Q6NX49 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AP1S2P1-201ENST00000457344 379 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC117440.1-201ENST00000474107 571 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC096576.1-201ENST00000489014 359 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AIG1P1-201ENST00000503376 148 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC009901.1-201ENST00000506703 541 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.57□□□□□ -2
ZNF544Q6NX49 Y_RNA.695-201ENST00000516715 107 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC090136.1-201ENST00000520009 240 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.57□□□□□ -2
ZNF544Q6NX49 ERHP1-201ENST00000523006 310 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.57□□□□□ -2
ZNF544Q6NX49 HPRT1P3-201ENST00000539521 576 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 CR383656.7-201ENST00000548164 174 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.57□□□□□ -2
ZNF544Q6NX49 MTCYBP33-201ENST00000575007 1130 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 MIR5697-201ENST00000578045 78 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC138761.3-201ENST00000579993 334 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 COX6CP3-201ENST00000580869 223 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AC073544.2-201ENST00000601155 540 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC068276.1-201ENST00000605793 379 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AC091965.4-201ENST00000607691 587 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC011939.3-201ENST00000613686 466 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 AC092140.2-201ENST00000618027 521 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.57□□□□□ -2
ZNF544Q6NX49 AC093591.3-201ENST00000634516 308 ntBASIC2.57□□□□□ -2
ZNF544Q6NX49 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.57□□□□□ -2
ZNF544Q6NX49 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
ZNF544Q6NX49 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
ZNF544Q6NX49 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
ZNF544Q6NX49 ZNF271P-202ENST00000465539 1970 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
ZNF544Q6NX49 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ZNF544Q6NX49 FRG1BP-201ENST00000278882 761 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 RNU6-853P-201ENST00000364306 107 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 RNU5E-5P-201ENST00000365379 116 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 Y_RNA.553-201ENST00000384670 102 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.56□□□□□ -2
ZNF544Q6NX49 U3.20-201ENST00000390909 217 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 BEND7P1-201ENST00000422058 457 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 BX119904.4-201ENST00000424402 301 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.56□□□□□ -2
ZNF544Q6NX49 AC010153.1-201ENST00000432862 727 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.56□□□□□ -2
ZNF544Q6NX49 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.56□□□□□ -2
ZNF544Q6NX49 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.56□□□□□ -2
ZNF544Q6NX49 SNRPGP9-201ENST00000456025 225 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 TPTE2P5-203ENST00000458118 728 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 SNORA59A-201ENST00000459326 152 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
ZNF544Q6NX49 AC004062.1-201ENST00000509926 645 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 AC105914.1-201ENST00000511798 226 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 RNU6-528P-201ENST00000516926 100 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 RNU6-201P-201ENST00000517100 61 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.56□□□□□ -2
ZNF544Q6NX49 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.56□□□□□ -2
ZNF544Q6NX49 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.56□□□□□ -2
ZNF544Q6NX49 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.56□□□□□ -2
ZNF544Q6NX49 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.56□□□□□ -2
ZNF544Q6NX49 MIR3605-201ENST00000583214 100 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 AC060766.3-201ENST00000591442 263 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 U73023.1-201ENST00000603134 700 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 XIAPP1-201ENST00000603162 600 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 AC087752.4-201ENST00000605911 462 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 AL590099.1-201ENST00000615276 138 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 AC009509.4-201ENST00000619202 509 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 AC002064.3-201ENST00000623448 346 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 AL603839.4-201ENST00000624658 1005 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.56□□□□□ -2
ZNF544Q6NX49 AC138915.1-201ENST00000565427 1685 ntBASIC2.56□□□□□ -2
ZNF544Q6NX49 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.55□□□□□ -2
ZNF544Q6NX49 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.55□□□□□ -2
ZNF544Q6NX49 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ZNF544Q6NX49 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
ZNF544Q6NX49 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 MIR26A1-201ENST00000362205 77 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 SNORD21-201ENST00000383953 95 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 MTCYBP36-201ENST00000404146 440 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 Y_RNA.608-201ENST00000410647 95 ntBASIC2.55□□□□□ -2
ZNF544Q6NX49 RNU2-47P-201ENST00000410649 186 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms