Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 MTATP6P13-201ENST00000438531 667 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 HMGB3P8-201ENST00000449709 577 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC092798.1-201ENST00000458542 409 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 FTH1P2-201ENST00000466086 412 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC104472.2-201ENST00000469035 601 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 RN7SL330P-201ENST00000469709 307 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 UQCRHP4-201ENST00000471686 272 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC105137.1-201ENST00000484355 562 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC109927.2-201ENST00000506416 303 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC104806.1-201ENST00000508720 308 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC105417.1-201ENST00000514691 285 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 RNA5SP519-201ENST00000516480 119 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 SNORA31.21-201ENST00000517180 77 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 DNAJC8P1-201ENST00000554535 372 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 NUTF2P8-201ENST00000604593 363 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AL161629.2-201ENST00000615347 275 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC007014.2-201ENST00000615581 479 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC008013.2-202ENST00000637965 364 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 OR52H1-202ENST00000641796 1061 ntBASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
PPP4R4Q6NUP7 AC091564.4-201ENST00000533934 2194 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 Y_RNA.38-201ENST00000362617 102 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-552P-201ENST00000362869 119 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-884P-201ENST00000363889 107 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 SNORA70.2-201ENST00000364506 135 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 Y_RNA.255-201ENST00000364581 97 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RNU1-64P-201ENST00000365443 163 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 Y_RNA.402-201ENST00000383972 102 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-903P-201ENST00000391270 109 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 CISD1P1-201ENST00000393907 327 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 BTF3P7-201ENST00000407097 488 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-387P-201ENST00000411331 105 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 BX323014.1-201ENST00000412876 237 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RPL30P2-201ENST00000414021 291 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RPL7P46-201ENST00000425129 740 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AL365496.1-201ENST00000426885 215 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 GTF2IP20-201ENST00000431663 360 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RPL36AP53-201ENST00000432891 316 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 CYCSP32-201ENST00000440548 321 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RPL23AP81-201ENST00000455252 467 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-261P-201ENST00000459506 102 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AC010618.1-201ENST00000469924 477 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RPL7P19-201ENST00000469948 618 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RPS29P19-201ENST00000479709 171 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AL163973.1-201ENST00000484753 577 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AF213884.1-201ENST00000488102 463 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AC009901.1-201ENST00000506703 541 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-1281P-201ENST00000516223 105 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-143P-201ENST00000516942 93 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 IGHV3-76-201ENST00000522465 295 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AC109635.3-201ENST00000529536 185 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AL359547.2-201ENST00000615810 418 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 Z99571.1-201ENST00000636677 394 ntBASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.87□□□□□ -1.79
PPP4R4Q6NUP7 MAPK10-362ENST00000641864 4484 ntBASIC3.86□□□□□ -1.79
PPP4R4Q6NUP7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPP4R4Q6NUP7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPP4R4Q6NUP7 AC103988.1-201ENST00000566382 2177 ntBASIC3.86□□□□□ -1.79
PPP4R4Q6NUP7 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPP4R4Q6NUP7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.86□□□□□ -1.79
PPP4R4Q6NUP7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-778P-201ENST00000363269 103 ntBASIC3.86□□□□□ -1.79
PPP4R4Q6NUP7 RN7SKP280-201ENST00000364196 304 ntBASIC3.86□□□□□ -1.79
PPP4R4Q6NUP7 RNU6-534P-201ENST00000364877 106 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 1010 ms