Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 SNORA53-201ENST00000391141 249 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 U3.39-201ENST00000408569 239 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 RPL19P1-201ENST00000411635 428 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 TMSB10P2-201ENST00000416049 131 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 AL160275.3-201ENST00000423876 471 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 AC007389.2-201ENST00000434630 306 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 RPL37P6-201ENST00000460682 294 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 RN7SL98P-201ENST00000462271 300 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 AC008481.1-201ENST00000463278 396 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 IGLVIV-65-201ENST00000517313 360 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 AC091144.1-201ENST00000519573 138 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 MRPL49P2-201ENST00000521066 465 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 AP003730.1-201ENST00000524605 285 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 FKBP1BP1-201ENST00000553366 325 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.9□□□□□ -1.46
RC3H1Q5TC82 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RC3H1Q5TC82 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RC3H1Q5TC82 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.9□□□□□ -1.47
RC3H1Q5TC82 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.47
RC3H1Q5TC82 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RC3H1Q5TC82 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RC3H1Q5TC82 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.9□□□□□ -1.47
RC3H1Q5TC82 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.9□□□□□ -1.47
RC3H1Q5TC82 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RC3H1Q5TC82 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RC3H1Q5TC82 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
RC3H1Q5TC82 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
RC3H1Q5TC82 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RC3H1Q5TC82 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RC3H1Q5TC82 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RC3H1Q5TC82 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.89□□□□□ -1.47
RC3H1Q5TC82 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.89□□□□□ -1.47
RC3H1Q5TC82 BX322639.1-202ENST00000423987 2213 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 RNU6-595P-201ENST00000363944 107 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 RNU6-371P-201ENST00000364283 108 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 RNA5SP366-201ENST00000365454 123 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 RNU6-933P-201ENST00000384424 107 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 RPS26P8-201ENST00000393490 348 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 AL590704.1-201ENST00000402856 794 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 AL513475.1-201ENST00000406602 315 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 RPS15AP6-201ENST00000420703 385 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 AL589765.3-201ENST00000446084 462 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.89□□□□□ -1.47
RC3H1Q5TC82 EEF1A1P1-201ENST00000447052 739 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 ISCUP1-201ENST00000454451 448 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 AC010631.1-201ENST00000474150 156 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.89□□□□□ -1.47
RC3H1Q5TC82 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.89□□□□□ -1.47
RC3H1Q5TC82 ARF4P1-201ENST00000605447 541 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 AC138965.3-201ENST00000623875 498 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 MIR492-201ENST00000638676 116 ntBASIC5.89□□□□□ -1.47
RC3H1Q5TC82 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 U3.13-201ENST00000364804 214 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 U8.8-201ENST00000365399 135 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 SNORD20-201ENST00000384550 80 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 RNU4-65P-201ENST00000410473 140 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 Y_RNA.602-201ENST00000410535 92 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 AC105137.1-201ENST00000484355 562 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 SNORA31.9-201ENST00000516429 84 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 AC092470.1-201ENST00000546187 132 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 AL442163.3-201ENST00000554110 156 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 AC011921.3-201ENST00000605540 361 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 TUG1_2.1-201ENST00000614234 87 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 MIR3653-201ENST00000625572 110 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 U6.92-201ENST00000636464 89 ntBASIC5.88□□□□□ -1.47
RC3H1Q5TC82 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RC3H1Q5TC82 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 RN7SKP280-201ENST00000364196 304 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 Y_RNA.233-201ENST00000364407 101 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 Y_RNA.292-201ENST00000364904 97 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 Y_RNA.418-201ENST00000384029 102 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 RNU4-78P-201ENST00000410940 126 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 RPL23AP81-201ENST00000455252 467 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 RPL21P41-201ENST00000459863 264 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.87□□□□□ -1.47
RC3H1Q5TC82 RNU6-677P-201ENST00000516914 101 ntBASIC5.87□□□□□ -1.47
RC3H1Q5TC82 AC109479.2-201ENST00000517842 174 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms