Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MIR937-201ENST00000401271 86 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 RN7SKP213-201ENST00000410746 298 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 EIF4HP2-201ENST00000424380 563 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH1Q08174 AL159987.2-201ENST00000432754 307 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDH1Q08174 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH1Q08174 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH1Q08174 RPSAP50-201ENST00000481955 852 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 AC008953.1-201ENST00000497334 318 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 RNU6-138P-201ENST00000515952 107 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH1Q08174 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH1Q08174 AMZ2P1-203ENST00000565833 850 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 MIR3691-201ENST00000578066 90 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 MIR5696-201ENST00000578474 85 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.74□□□□□ -1.65
PCDH1Q08174 AC012433.1-201ENST00000588916 398 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDH1Q08174 AC009314.1-201ENST00000603871 304 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.74□□□□□ -1.65
PCDH1Q08174 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.74□□□□□ -1.65
PCDH1Q08174 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PCDH1Q08174 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDH1Q08174 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.74□□□□□ -1.65
PCDH1Q08174 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH1Q08174 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PCDH1Q08174 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PCDH1Q08174 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDH1Q08174 AC009643.2-201ENST00000603543 1448 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDH1Q08174 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
PCDH1Q08174 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-212P-201ENST00000362642 104 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNA5SP305-201ENST00000362665 119 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-37P-201ENST00000362692 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 Y_RNA.183-201ENST00000363882 113 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-11P-201ENST00000364234 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-7-201ENST00000364784 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-8-201ENST00000365467 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-25P-201ENST00000383873 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-1-201ENST00000383898 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-48P-201ENST00000384161 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-36P-201ENST00000384172 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-4P-201ENST00000384205 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-5P-201ENST00000384238 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-3P-201ENST00000384314 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-16P-201ENST00000384385 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-15P-201ENST00000384534 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-2-201ENST00000384627 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-29P-201ENST00000384637 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-9-201ENST00000384776 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-33P-201ENST00000384793 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDH1Q08174 RPL23AP27-201ENST00000415161 451 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RAC1P3-201ENST00000416129 580 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 AL590135.1-201ENST00000422215 156 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 MTCO1P39-201ENST00000426148 480 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.73□□□□□ -1.65
PCDH1Q08174 MTND5P15-201ENST00000434246 349 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH1Q08174 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDH1Q08174 PTMAP3-201ENST00000447474 330 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH1Q08174 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH1Q08174 IFNWP4-201ENST00000453148 294 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 AL445433.1-201ENST00000457507 257 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 U8.21-201ENST00000459536 136 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 GZMAP1-201ENST00000503054 631 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 AC007016.1-201ENST00000512110 244 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 AC004980.4-201ENST00000513375 203 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RN7SKP46-201ENST00000515942 234 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNA5SP360-201ENST00000516555 118 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-111P-201ENST00000517179 105 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU4-60P-201ENST00000517239 135 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH1Q08174 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH1Q08174 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH1Q08174 CYCSP40-201ENST00000575927 294 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 AL161798.1-201ENST00000604630 131 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 RNU6-6P-201ENST00000606623 107 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.73□□□□□ -1.65
PCDH1Q08174 MIR7155-201ENST00000615925 56 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 MIR8069-1-201ENST00000616627 86 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 MIR8069-2-201ENST00000621412 86 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.73□□□□□ -1.65
PCDH1Q08174 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDH1Q08174 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PCDH1Q08174 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDH1Q08174 MTND5P9-201ENST00000503854 1755 ntBASIC4.73□□□□□ -1.65
PCDH1Q08174 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDH1Q08174 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PCDH1Q08174 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
PCDH1Q08174 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.72□□□□□ -1.65
PCDH1Q08174 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH1Q08174 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PCDH1Q08174 ZFRP1-201ENST00000457579 2970 ntBASIC4.72□□□□□ -1.65
PCDH1Q08174 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
PCDH1Q08174 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms