Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
UBE3AQ05086 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBE3AQ05086 AL049641.1-201ENST00000441055 1948 ntBASIC3.6□□□□□ -1.83
UBE3AQ05086 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.6□□□□□ -1.83
UBE3AQ05086 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
UBE3AQ05086 AL137003.2-201ENST00000606924 2538 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UBE3AQ05086 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
UBE3AQ05086 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
UBE3AQ05086 RNU6-39P-201ENST00000384344 107 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 BTF3L4P3-201ENST00000418879 476 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 PIGFP2-201ENST00000421400 651 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 COTL1P1-201ENST00000422309 375 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.59□□□□□ -1.83
UBE3AQ05086 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.59□□□□□ -1.83
UBE3AQ05086 HMGB1P27-201ENST00000431429 603 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 MTCO3P5-201ENST00000433620 714 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 Z82210.1-201ENST00000440037 231 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 NEFMP1-201ENST00000443423 1006 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AC013267.1-201ENST00000458227 267 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 RPL37P6-201ENST00000460682 294 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.59□□□□□ -1.83
UBE3AQ05086 KC877373.1-201ENST00000479066 408 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AC006445.2-201ENST00000510061 472 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.59□□□□□ -1.83
UBE3AQ05086 RNU6-405P-201ENST00000516637 110 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 RNU6-1220P-201ENST00000517126 108 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.59□□□□□ -1.83
UBE3AQ05086 MTCO2P4-201ENST00000517968 247 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.59□□□□□ -1.83
UBE3AQ05086 AP006587.4-201ENST00000526053 529 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 TRAV28-201ENST00000557548 323 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.59□□□□□ -1.83
UBE3AQ05086 AC034105.3-201ENST00000565294 442 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 GLUD1P4-201ENST00000590914 418 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AL451007.1-201ENST00000595491 289 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AC068790.2-201ENST00000602601 557 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AC079089.3-201ENST00000603094 673 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AL161729.4-201ENST00000604650 476 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AP002360.4-201ENST00000606980 481 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 AC104073.3-201ENST00000610942 955 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.59□□□□□ -1.83
UBE3AQ05086 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.59□□□□□ -1.83
UBE3AQ05086 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.59□□□□□ -1.83
UBE3AQ05086 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
UBE3AQ05086 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
UBE3AQ05086 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
UBE3AQ05086 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3AQ05086 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3AQ05086 AC073343.1-201ENST00000328239 651 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 MIR422A-201ENST00000362286 90 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 RNU1-140P-201ENST00000365040 165 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 RNU6-169P-201ENST00000365336 107 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.58□□□□□ -1.84
UBE3AQ05086 AC093106.2-201ENST00000428212 385 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3AQ05086 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.58□□□□□ -1.84
UBE3AQ05086 NEK4P1-201ENST00000433383 879 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.58□□□□□ -1.84
UBE3AQ05086 HMGB3P12-201ENST00000438745 556 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 RPL23AP14-201ENST00000468281 468 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 UBE2DNL-203ENST00000474922 222 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 AC004924.1-201ENST00000480160 781 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.58□□□□□ -1.84
UBE3AQ05086 KCTD9P5-201ENST00000504141 1170 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 AC097462.2-201ENST00000504623 481 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.58□□□□□ -1.84
UBE3AQ05086 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.58□□□□□ -1.84
UBE3AQ05086 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3AQ05086 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.58□□□□□ -1.84
UBE3AQ05086 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.58□□□□□ -1.84
UBE3AQ05086 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.58□□□□□ -1.84
UBE3AQ05086 AL391840.1-201ENST00000571144 367 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 AC067852.3-201ENST00000589177 561 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3AQ05086 AL136363.1-201ENST00000605349 337 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3AQ05086 AC007619.2-201ENST00000605743 379 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 HULC.1-201ENST00000612720 240 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.58□□□□□ -1.84
UBE3AQ05086 XIST_intron.1-201ENST00000619444 68 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3AQ05086 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3AQ05086 MTND1P37-201ENST00000636562 264 ntBASIC3.58□□□□□ -1.84
UBE3AQ05086 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3AQ05086 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3AQ05086 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.58□□□□□ -1.84
UBE3AQ05086 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.58□□□□□ -1.84
UBE3AQ05086 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
UBE3AQ05086 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
UBE3AQ05086 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
UBE3AQ05086 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UBE3AQ05086 RNU6-960P-201ENST00000364056 120 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 RNU6-188P-201ENST00000364207 107 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UBE3AQ05086 MIR558-201ENST00000384920 94 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 RNU2-16P-201ENST00000410712 136 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 RNA5SP38-201ENST00000410750 119 ntBASIC3.57□□□□□ -1.84
UBE3AQ05086 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
UBE3AQ05086 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms