Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC099506.2-201ENST00000623074 221 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 AC068880.5-201ENST00000624331 290 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 AC110994.2-201ENST00000635481 492 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 AP003399.1-201ENST00000637534 361 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
RHBDL3P58872 FAM35CP-201ENST00000554755 2470 ntBASIC3.95□□□□□ -1.78
RHBDL3P58872 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RHBDL3P58872 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.94□□□□□ -1.78
RHBDL3P58872 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.94□□□□□ -1.78
RHBDL3P58872 TEX21P-201ENST00000447107 1476 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 U8.3-201ENST00000363321 132 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RHBDL3P58872 RNU4-47P-201ENST00000410876 114 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 RNU2-68P-201ENST00000410878 191 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.94□□□□□ -1.78
RHBDL3P58872 ISCA1P1-201ENST00000426679 387 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AL671855.1-201ENST00000446875 1203 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AC093331.1-201ENST00000521474 169 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.94□□□□□ -1.78
RHBDL3P58872 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.94□□□□□ -1.78
RHBDL3P58872 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.94□□□□□ -1.78
RHBDL3P58872 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.94□□□□□ -1.78
RHBDL3P58872 AC073544.2-201ENST00000601155 540 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AL358072.1-201ENST00000604156 575 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AC007363.1-201ENST00000604736 620 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AC004805.2-201ENST00000605382 482 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AC007619.2-201ENST00000605743 379 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AC107294.3-201ENST00000609211 526 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AL161734.1-201ENST00000609720 557 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 AC244205.2-202ENST00000635781 342 ntBASIC3.94□□□□□ -1.78
RHBDL3P58872 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RHBDL3P58872 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RHBDL3P58872 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
RHBDL3P58872 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RHBDL3P58872 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDL3P58872 GABRG2-229ENST00000641017 3628 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDL3P58872 RNU6-190P-201ENST00000384154 102 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC096664.2-201ENST00000411843 406 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDL3P58872 MED13P1-201ENST00000428342 171 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.93□□□□□ -1.78
RHBDL3P58872 HMGB1P9-201ENST00000429856 646 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDL3P58872 AC010153.1-201ENST00000432862 727 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDL3P58872 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDL3P58872 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDL3P58872 AC008264.1-201ENST00000447612 367 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.93□□□□□ -1.78
RHBDL3P58872 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.93□□□□□ -1.78
RHBDL3P58872 FABP5P15-201ENST00000453566 214 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 RPL26P9-201ENST00000457466 433 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC091179.1-201ENST00000461606 579 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC006445.1-201ENST00000491925 405 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC080014.1-201ENST00000496877 1201 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC026801.1-201ENST00000497178 464 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.93□□□□□ -1.78
RHBDL3P58872 SNORA18.6-201ENST00000516792 115 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDL3P58872 HMGB1P41-201ENST00000520234 440 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.93□□□□□ -1.78
RHBDL3P58872 SUB1P1-201ENST00000524415 382 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.93□□□□□ -1.78
RHBDL3P58872 AC087883.1-201ENST00000551882 391 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 NACAP3-201ENST00000552100 481 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC106782.4-201ENST00000568264 210 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 BNIP3P9-201ENST00000603714 553 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 AC090578.1-201ENST00000604955 591 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDL3P58872 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.93□□□□□ -1.78
RHBDL3P58872 AC099654.7-201ENST00000635788 2127 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDL3P58872 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RHBDL3P58872 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDL3P58872 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
RHBDL3P58872 SRP72P2-201ENST00000344851 1979 ntBASIC3.93□□□□□ -1.78
RHBDL3P58872 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.92□□□□□ -1.78
RHBDL3P58872 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDL3P58872 CEP170P1-201ENST00000502249 4587 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDL3P58872 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDL3P58872 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RHBDL3P58872 CR848007.1-201ENST00000442354 1699 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 Y_RNA.201-201ENST00000364052 96 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RHBDL3P58872 RNA5SP354-201ENST00000391247 136 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDL3P58872 AL136116.1-201ENST00000403591 381 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.92□□□□□ -1.78
RHBDL3P58872 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.92□□□□□ -1.78
RHBDL3P58872 AC002075.2-201ENST00000425207 252 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AC009961.2-201ENST00000435771 251 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AC006028.1-201ENST00000438379 402 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 RPL37P4-201ENST00000448908 268 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 RPL12P25-201ENST00000455592 494 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AC109925.1-201ENST00000478069 331 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AC233702.1-201ENST00000482905 502 ntBASIC3.92□□□□□ -1.78
RHBDL3P58872 AC114786.4-201ENST00000508771 728 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms