Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 MARK2P15-201ENST00000432204 2186 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AL136164.3-201ENST00000624429 3978 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AC007785.2-201ENST00000598627 1916 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.18□□□□□ -1.74
GFRA1P56159 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GFRA1P56159 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GFRA1P56159 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
GFRA1P56159 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.18□□□□□ -1.74
GFRA1P56159 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
GFRA1P56159 OR14L1P-202ENST00000641545 3009 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 AL672167.1-204ENST00000641875 3017 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
GFRA1P56159 LINC01355-201ENST00000566551 5444 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
GFRA1P56159 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.18□□□□□ -1.74
GFRA1P56159 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.18□□□□□ -1.74
GFRA1P56159 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
GFRA1P56159 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.17□□□□□ -1.74
GFRA1P56159 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.17□□□□□ -1.74
GFRA1P56159 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.17□□□□□ -1.74
GFRA1P56159 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.17□□□□□ -1.74
GFRA1P56159 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
GFRA1P56159 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
GFRA1P56159 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.17□□□□□ -1.74
GFRA1P56159 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GFRA1P56159 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
GFRA1P56159 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GFRA1P56159 Y_RNA.133-201ENST00000363428 110 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 RNU1-32P-201ENST00000363937 159 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 RNU6-384P-201ENST00000364900 104 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 RNU6-463P-201ENST00000384340 107 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 MIR129-1-201ENST00000384972 72 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
GFRA1P56159 RNU2-68P-201ENST00000410878 191 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 RNU6-325P-201ENST00000411132 105 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 AC096664.2-201ENST00000411843 406 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.17□□□□□ -1.74
GFRA1P56159 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.17□□□□□ -1.74
GFRA1P56159 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.17□□□□□ -1.74
GFRA1P56159 RPS15AP10-201ENST00000432472 382 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.17□□□□□ -1.74
GFRA1P56159 Z82210.1-201ENST00000440037 231 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.17□□□□□ -1.74
GFRA1P56159 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.17□□□□□ -1.74
GFRA1P56159 AL031274.1-201ENST00000450334 232 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 NDUFS5P3-201ENST00000450668 321 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 RNU6-1037P-201ENST00000459571 107 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 AC068781.1-201ENST00000488231 618 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.17□□□□□ -1.74
GFRA1P56159 HMGB3P16-201ENST00000508037 287 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 RNA5SP165-201ENST00000517142 115 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.17□□□□□ -1.74
GFRA1P56159 AP001781.1-201ENST00000530977 207 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.17□□□□□ -1.74
GFRA1P56159 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.17□□□□□ -1.74
GFRA1P56159 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
GFRA1P56159 AC093227.2-201ENST00000589357 285 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 AL645944.1-201ENST00000603857 493 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 AL121917.1-203ENST00000605534 577 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 Z98200.1-201ENST00000607298 470 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.17□□□□□ -1.74
GFRA1P56159 MIR7641-1-201ENST00000627518 61 ntBASIC4.17□□□□□ -1.74
GFRA1P56159 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.17□□□□□ -1.74
GFRA1P56159 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
GFRA1P56159 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
GFRA1P56159 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.17□□□□□ -1.74
GFRA1P56159 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.16□□□□□ -1.74
GFRA1P56159 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.16□□□□□ -1.74
GFRA1P56159 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
GFRA1P56159 AC021146.4-201ENST00000309229 279 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-37P-201ENST00000362692 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-11P-201ENST00000364234 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-7-201ENST00000364784 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU1-115P-201ENST00000365329 160 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-596P-201ENST00000365395 98 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-8-201ENST00000365467 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-25P-201ENST00000383873 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-1-201ENST00000383898 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-48P-201ENST00000384161 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-36P-201ENST00000384172 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-4P-201ENST00000384205 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-5P-201ENST00000384238 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-3P-201ENST00000384314 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-16P-201ENST00000384385 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-15P-201ENST00000384534 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-2-201ENST00000384627 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-29P-201ENST00000384637 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-9-201ENST00000384776 107 ntBASIC4.16□□□□□ -1.74
GFRA1P56159 RNU6-33P-201ENST00000384793 107 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms