Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.86□□□□□ -1.95
HMGCS2P54868 AC022447.3-201ENST00000506865 495 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.86□□□□□ -1.95
HMGCS2P54868 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGCS2P54868 MTND5P4-201ENST00000514978 288 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.86□□□□□ -1.95
HMGCS2P54868 AC013828.2-201ENST00000532487 235 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGCS2P54868 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.86□□□□□ -1.95
HMGCS2P54868 AL355836.1-201ENST00000555951 870 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 MIR4648-201ENST00000580107 72 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HMGCS2P54868 AC009570.1-201ENST00000609599 745 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 AC046143.2-201ENST00000609789 160 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGCS2P54868 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
HMGCS2P54868 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 MAPK10-322ENST00000641485 4530 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 AC006378.2-201ENST00000623178 2476 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGCS2P54868 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGCS2P54868 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
HMGCS2P54868 RNU6-1155P-201ENST00000363554 107 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 RNU6-359P-201ENST00000365466 108 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 MIR135A2-201ENST00000384854 100 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 MTCO1P17-201ENST00000411522 491 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGCS2P54868 UBE2D3P2-201ENST00000424409 445 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC079780.1-201ENST00000428259 207 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AL365184.2-201ENST00000431139 435 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGCS2P54868 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGCS2P54868 HMGB3P12-201ENST00000438745 556 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC104389.3-201ENST00000445629 235 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 WASF1P1-201ENST00000447560 1131 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGCS2P54868 PAXBP1P1-201ENST00000449315 447 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 KATNBL1P6-201ENST00000453433 915 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGCS2P54868 SNORD121B-201ENST00000458838 81 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 RPL30P14-201ENST00000482744 348 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC106038.2-201ENST00000520706 568 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC021269.2-201ENST00000532318 330 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC068587.4-201ENST00000533893 186 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 CR383656.7-201ENST00000548164 174 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGCS2P54868 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGCS2P54868 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGCS2P54868 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.85□□□□□ -1.95
HMGCS2P54868 AC034268.2-201ENST00000571784 482 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AP005136.1-201ENST00000579765 429 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGCS2P54868 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGCS2P54868 MIR4307-201ENST00000582802 84 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.85□□□□□ -1.95
HMGCS2P54868 BNIP3P23-201ENST00000599655 511 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC010620.1-201ENST00000601088 1102 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AC098826.3-201ENST00000603823 466 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 DUXAP11-201ENST00000603858 526 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 AL022161.1-201ENST00000604390 213 ntBASIC2.85□□□□□ -1.95
HMGCS2P54868 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
HMGCS2P54868 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGCS2P54868 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
HMGCS2P54868 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGCS2P54868 AC092435.3-201ENST00000565538 3654 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
HMGCS2P54868 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.84□□□□□ -1.95
HMGCS2P54868 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.84□□□□□ -1.95
HMGCS2P54868 PABPC1P9-201ENST00000426076 1612 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
HMGCS2P54868 RNU4-21P-201ENST00000362802 126 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 RNU1-100P-201ENST00000365255 165 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 SNORA1.3-201ENST00000384676 136 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 AL356421.1-201ENST00000403255 413 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.84□□□□□ -1.95
HMGCS2P54868 AC007064.1-201ENST00000412238 351 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 AL513477.1-202ENST00000417061 214 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 SSXP9-201ENST00000417503 292 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGCS2P54868 MTND2P22-201ENST00000444325 1033 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 GDI2P2-201ENST00000445131 608 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGCS2P54868 snoU13.8-201ENST00000458890 104 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGCS2P54868 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HMGCS2P54868 AC106872.3-201ENST00000495104 446 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGCS2P54868 RNA5SP281-201ENST00000516504 135 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 IGKV3-31-201ENST00000523109 329 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
HMGCS2P54868 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.84□□□□□ -1.95
HMGCS2P54868 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.84□□□□□ -1.95
HMGCS2P54868 AC091489.2-201ENST00000566263 604 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 OR4K8P-201ENST00000578842 1048 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.84□□□□□ -1.95
HMGCS2P54868 UBE2L4-201ENST00000587688 464 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 AL158827.2-201ENST00000602494 330 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 AC097065.2-201ENST00000608159 533 ntBASIC2.84□□□□□ -1.95
HMGCS2P54868 AL590099.1-201ENST00000615276 138 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms