Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 AL139247.1-201ENST00000422768 325 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 AC018644.1-201ENST00000429934 551 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 NOTCH2P1-201ENST00000443481 624 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 MRPL50P4-201ENST00000446432 475 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC6A4P31645 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC6A4P31645 FAM206BP-201ENST00000510179 541 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 RN7SKP258-201ENST00000517151 304 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 RPL7P20-201ENST00000520308 745 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC6A4P31645 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC6A4P31645 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC6A4P31645 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC6A4P31645 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.96□□□□□ -1.78
SLC6A4P31645 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC6A4P31645 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC6A4P31645 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC6A4P31645 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.96□□□□□ -1.78
SLC6A4P31645 MIR4742-201ENST00000581069 85 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 AC008521.1-201ENST00000587471 187 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 AC005498.1-201ENST00000592125 465 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.96□□□□□ -1.78
SLC6A4P31645 HMGN2P28-201ENST00000606102 262 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC6A4P31645 AC012409.4-201ENST00000612923 249 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 AL359547.2-201ENST00000615810 418 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 AP004289.2-201ENST00000444413 1457 ntBASIC3.96□□□□□ -1.78
SLC6A4P31645 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC6A4P31645 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC6A4P31645 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC6A4P31645 RNU6-525P-201ENST00000363685 104 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 RNA5SP387-201ENST00000364226 106 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 RNU6-550P-201ENST00000391057 101 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 RNU6-817P-201ENST00000391083 104 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AL122016.1-201ENST00000403365 367 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 RPL30P2-201ENST00000414021 291 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC016831.2-201ENST00000417179 352 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 USP9YP20-201ENST00000419224 558 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 HSPE1P1-201ENST00000421494 318 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC6A4P31645 AC018630.2-202ENST00000422992 927 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 MTATP6P4-201ENST00000427725 675 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC093106.2-201ENST00000428212 385 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 NEFMP1-201ENST00000443423 1006 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC6A4P31645 AC020550.1-201ENST00000447385 163 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AL133547.1-201ENST00000448546 220 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC6A4P31645 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC6A4P31645 RNU6-953P-201ENST00000459154 107 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC6A4P31645 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC6A4P31645 AC103851.1-201ENST00000506833 274 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 GMPSP1-201ENST00000514075 579 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC6A4P31645 RNU4-49P-201ENST00000516080 140 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 RNU6-677P-201ENST00000516914 101 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 SNORA31.22-201ENST00000517204 135 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AP006587.4-201ENST00000526053 529 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 MIR4795-201ENST00000584182 89 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC044792.1-201ENST00000593294 196 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC6A4P31645 AL138889.2-201ENST00000603883 242 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC021646.1-201ENST00000605469 484 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC005344.1-201ENST00000613391 459 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC004696.1-201ENST00000614345 607 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 RMST_7.1-201ENST00000621935 268 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AC090574.1-201ENST00000623186 233 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AP003400.5-201ENST00000624827 617 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC6A4P31645 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC6A4P31645 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.95□□□□□ -1.78
SLC6A4P31645 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC6A4P31645 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC6A4P31645 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC6A4P31645 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC6A4P31645 AC009812.4-201ENST00000569134 1805 ntBASIC3.95□□□□□ -1.78
SLC6A4P31645 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC6A4P31645 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC6A4P31645 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A4P31645 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A4P31645 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC6A4P31645 MIR208A-201ENST00000362287 71 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 SNORA71.3-201ENST00000362582 128 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 RNU6-116P-201ENST00000384042 109 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 RNU6-190P-201ENST00000384154 102 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 AL590704.1-201ENST00000402856 794 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 RNU6-1148P-201ENST00000410992 104 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 EI24P1-201ENST00000416584 867 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 RPL7P10-201ENST00000417407 739 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 AL451054.2-201ENST00000420896 202 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 AL353678.1-201ENST00000422735 741 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 AL591419.1-201ENST00000427423 339 ntBASIC3.94□□□□□ -1.78
SLC6A4P31645 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC6A4P31645 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC6A4P31645 FABP5P13-201ENST00000452144 328 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms