Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.78□□□□□ -1.64
NID1P14543 AC006272.2-201ENST00000594725 163 ntBASIC4.78□□□□□ -1.64
NID1P14543 AC069307.1-201ENST00000602820 447 ntBASIC4.78□□□□□ -1.64
NID1P14543 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.78□□□□□ -1.64
NID1P14543 AC100827.5-201ENST00000615883 426 ntBASIC4.78□□□□□ -1.64
NID1P14543 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.78□□□□□ -1.64
NID1P14543 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
NID1P14543 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
NID1P14543 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
NID1P14543 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
NID1P14543 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
NID1P14543 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.78□□□□□ -1.64
NID1P14543 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.78□□□□□ -1.64
NID1P14543 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
NID1P14543 Y_RNA.82-201ENST00000363000 102 ntBASIC4.77□□□□□ -1.65
NID1P14543 Y_RNA.92-201ENST00000363043 102 ntBASIC4.77□□□□□ -1.65
NID1P14543 U3.6-201ENST00000363622 211 ntBASIC4.77□□□□□ -1.65
NID1P14543 RN7SKP103-201ENST00000363848 320 ntBASIC4.77□□□□□ -1.65
NID1P14543 Y_RNA.235-201ENST00000364412 102 ntBASIC4.77□□□□□ -1.65
NID1P14543 Y_RNA.306-201ENST00000365015 102 ntBASIC4.77□□□□□ -1.65
NID1P14543 Y_RNA.312-201ENST00000365089 102 ntBASIC4.77□□□□□ -1.65
NID1P14543 Y_RNA.322-201ENST00000365151 102 ntBASIC4.77□□□□□ -1.65
NID1P14543 SNORD116-18-201ENST00000383961 92 ntBASIC4.77□□□□□ -1.65
NID1P14543 Y_RNA.435-201ENST00000384095 112 ntBASIC4.77□□□□□ -1.65
NID1P14543 SNORD20-201ENST00000384550 80 ntBASIC4.77□□□□□ -1.65
NID1P14543 AL645733.1-201ENST00000402250 217 ntBASIC4.77□□□□□ -1.65
NID1P14543 SNORD56-201ENST00000413522 71 ntBASIC4.77□□□□□ -1.65
NID1P14543 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.77□□□□□ -1.65
NID1P14543 AL451062.2-201ENST00000427515 271 ntBASIC4.77□□□□□ -1.65
NID1P14543 RPL21P40-201ENST00000428586 483 ntBASIC4.77□□□□□ -1.65
NID1P14543 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.77□□□□□ -1.65
NID1P14543 CEACAMP7-201ENST00000444105 496 ntBASIC4.77□□□□□ -1.65
NID1P14543 AL356981.1-201ENST00000454879 684 ntBASIC4.77□□□□□ -1.65
NID1P14543 Y_RNA.650-201ENST00000459002 102 ntBASIC4.77□□□□□ -1.65
NID1P14543 RN7SL222P-201ENST00000476452 299 ntBASIC4.77□□□□□ -1.65
NID1P14543 AC012158.1-204ENST00000483430 465 ntBASIC4.77□□□□□ -1.65
NID1P14543 SUMO2P6-201ENST00000505273 288 ntBASIC4.77□□□□□ -1.65
NID1P14543 RNU6-1219P-201ENST00000516143 112 ntBASIC4.77□□□□□ -1.65
NID1P14543 RNA5SP228-201ENST00000516232 133 ntBASIC4.77□□□□□ -1.65
NID1P14543 RN7SKP277-201ENST00000516895 283 ntBASIC4.77□□□□□ -1.65
NID1P14543 Y_RNA.777-201ENST00000516982 102 ntBASIC4.77□□□□□ -1.65
NID1P14543 EDDM3DP-201ENST00000554692 434 ntBASIC4.77□□□□□ -1.65
NID1P14543 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.77□□□□□ -1.65
NID1P14543 FAM60BP-201ENST00000578364 658 ntBASIC4.77□□□□□ -1.65
NID1P14543 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.77□□□□□ -1.65
NID1P14543 Y_RNA.771-201ENST00000598668 102 ntBASIC4.77□□□□□ -1.65
NID1P14543 AL365222.1-201ENST00000614661 98 ntBASIC4.77□□□□□ -1.65
NID1P14543 Y_RNA.789-201ENST00000622480 102 ntBASIC4.77□□□□□ -1.65
NID1P14543 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.77□□□□□ -1.65
NID1P14543 Z99571.1-201ENST00000636677 394 ntBASIC4.77□□□□□ -1.65
NID1P14543 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.77□□□□□ -1.65
NID1P14543 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NID1P14543 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.65
NID1P14543 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.77□□□□□ -1.65
NID1P14543 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
NID1P14543 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
NID1P14543 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
NID1P14543 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
NID1P14543 AC083843.3-201ENST00000623679 2186 ntBASIC4.77□□□□□ -1.65
NID1P14543 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
NID1P14543 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
NID1P14543 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NID1P14543 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NID1P14543 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.76□□□□□ -1.65
NID1P14543 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.76□□□□□ -1.65
NID1P14543 AC139769.1-204ENST00000472297 1931 ntBASIC4.76□□□□□ -1.65
NID1P14543 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NID1P14543 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NID1P14543 RNU6-1301P-201ENST00000362724 104 ntBASIC4.76□□□□□ -1.65
NID1P14543 U8.4-201ENST00000363626 134 ntBASIC4.76□□□□□ -1.65
NID1P14543 RN7SKP227-201ENST00000364445 330 ntBASIC4.76□□□□□ -1.65
NID1P14543 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC4.76□□□□□ -1.65
NID1P14543 Y_RNA.441-201ENST00000384123 112 ntBASIC4.76□□□□□ -1.65
NID1P14543 RNU6-514P-201ENST00000384208 107 ntBASIC4.76□□□□□ -1.65
NID1P14543 Y_RNA.569-201ENST00000384749 103 ntBASIC4.76□□□□□ -1.65
NID1P14543 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NID1P14543 MIR550A3-201ENST00000390735 95 ntBASIC4.76□□□□□ -1.65
NID1P14543 Y_RNA.623-201ENST00000411128 95 ntBASIC4.76□□□□□ -1.65
NID1P14543 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.76□□□□□ -1.65
NID1P14543 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.76□□□□□ -1.65
NID1P14543 AL358453.1-201ENST00000422522 250 ntBASIC4.76□□□□□ -1.65
NID1P14543 HMGN2P27-201ENST00000427352 270 ntBASIC4.76□□□□□ -1.65
NID1P14543 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.76□□□□□ -1.65
NID1P14543 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.76□□□□□ -1.65
NID1P14543 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.76□□□□□ -1.65
NID1P14543 RPL30P1-201ENST00000488676 339 ntBASIC4.76□□□□□ -1.65
NID1P14543 AC140059.1-201ENST00000489238 361 ntBASIC4.76□□□□□ -1.65
NID1P14543 RNU6-612P-201ENST00000516909 102 ntBASIC4.76□□□□□ -1.65
NID1P14543 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.76□□□□□ -1.65
NID1P14543 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NID1P14543 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.76□□□□□ -1.65
NID1P14543 TRAV37-201ENST00000553906 342 ntBASIC4.76□□□□□ -1.65
NID1P14543 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.76□□□□□ -1.65
NID1P14543 AC090617.3-201ENST00000573670 475 ntBASIC4.76□□□□□ -1.65
NID1P14543 AC073136.1-201ENST00000449426 2884 ntBASIC4.76□□□□□ -1.65
NID1P14543 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NID1P14543 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
NID1P14543 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NID1P14543 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.76□□□□□ -1.65
NID1P14543 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms