Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL6A2P12110 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
COL6A2P12110 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL6A2P12110 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL6A2P12110 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
COL6A2P12110 MTND5P19-201ENST00000424872 1794 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
COL6A2P12110 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.3□□□□□ -1.72
COL6A2P12110 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL6A2P12110 Y_RNA.31-201ENST00000362574 102 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 RNA5SP388-201ENST00000362584 119 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 RNU6-288P-201ENST00000363690 104 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL6A2P12110 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL6A2P12110 RNU6-639P-201ENST00000384074 107 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 RNU6-45P-201ENST00000384471 107 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.3□□□□□ -1.72
COL6A2P12110 RN7SKP106-201ENST00000410832 272 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 RAC1P3-201ENST00000416129 580 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.3□□□□□ -1.72
COL6A2P12110 RPL31P12-201ENST00000422587 358 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.3□□□□□ -1.72
COL6A2P12110 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.3□□□□□ -1.72
COL6A2P12110 GPM6BP2-201ENST00000432046 144 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.3□□□□□ -1.72
COL6A2P12110 GPM6BP1-201ENST00000446387 144 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 MTCO3P10-201ENST00000455912 772 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 RPL30P15-201ENST00000457129 321 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 SNORD108-201ENST00000459332 71 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 RN7SL585P-201ENST00000470538 280 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 AC110792.1-201ENST00000491826 472 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.3□□□□□ -1.72
COL6A2P12110 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
COL6A2P12110 AP001781.1-201ENST00000530977 207 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.3□□□□□ -1.72
COL6A2P12110 TOMM20P2-201ENST00000540082 421 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.3□□□□□ -1.72
COL6A2P12110 AC005951.2-201ENST00000576282 495 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.3□□□□□ -1.72
COL6A2P12110 MIR15A-201ENST00000607334 83 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 AC019193.3-201ENST00000609144 554 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 AC008785.1-201ENST00000624475 456 ntBASIC4.3□□□□□ -1.72
COL6A2P12110 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL6A2P12110 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL6A2P12110 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
COL6A2P12110 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
COL6A2P12110 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
COL6A2P12110 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL6A2P12110 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL6A2P12110 SNORD3E-201ENST00000362899 217 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 Y_RNA.480-201ENST00000384364 102 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 RNU6-310P-201ENST00000384655 107 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 FAR2P2-201ENST00000413041 594 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.29□□□□□ -1.72
COL6A2P12110 AC245028.1-201ENST00000423259 256 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 HMGB1P27-201ENST00000431429 603 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL6A2P12110 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.29□□□□□ -1.72
COL6A2P12110 RPL21P41-201ENST00000459863 264 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 AC087588.1-201ENST00000462203 316 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 AC087884.1-201ENST00000469738 328 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 HSPE1P6-201ENST00000479457 291 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 AC026801.1-201ENST00000497178 464 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.29□□□□□ -1.72
COL6A2P12110 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.29□□□□□ -1.72
COL6A2P12110 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.29□□□□□ -1.72
COL6A2P12110 AC116337.1-201ENST00000509680 687 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 RNU6-927P-201ENST00000516199 100 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 RNU6-1016P-201ENST00000516689 94 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 AC087854.1-201ENST00000519706 414 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.29□□□□□ -1.72
COL6A2P12110 AC063950.1-201ENST00000552036 308 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 AC136443.5-201ENST00000603741 370 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 HMGN2P28-201ENST00000606102 262 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 AC034102.8-201ENST00000615146 484 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 AL021997.2-201ENST00000615674 271 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 MIR7702-201ENST00000621931 59 ntBASIC4.29□□□□□ -1.72
COL6A2P12110 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.29□□□□□ -1.72
COL6A2P12110 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
COL6A2P12110 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL6A2P12110 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL6A2P12110 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL6A2P12110 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
COL6A2P12110 RNA5SP167-201ENST00000365461 116 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 Y_RNA.534-201ENST00000384599 112 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 MIR141-201ENST00000384975 95 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL6A2P12110 AC097374.1-203ENST00000400783 485 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 BX842559.1-201ENST00000419615 532 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.28□□□□□ -1.72
COL6A2P12110 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.28□□□□□ -1.72
COL6A2P12110 TXNP1-201ENST00000441872 371 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.28□□□□□ -1.72
COL6A2P12110 AC009220.1-201ENST00000451614 275 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.28□□□□□ -1.72
COL6A2P12110 RPL35AP15-201ENST00000468042 339 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.28□□□□□ -1.72
COL6A2P12110 AC104164.2-201ENST00000496953 495 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 AC009901.1-201ENST00000506703 541 ntBASIC4.28□□□□□ -1.72
COL6A2P12110 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms