Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OR5BN1P-201ENST00000532955 829 ntBASIC2.48□□□□□ -2.01
RETP07949 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.48□□□□□ -2.01
RETP07949 AC007115.1-201ENST00000546853 234 ntBASIC2.48□□□□□ -2.01
RETP07949 HSPE1P3-201ENST00000559254 309 ntBASIC2.48□□□□□ -2.01
RETP07949 OR4K7P-201ENST00000580232 945 ntBASIC2.48□□□□□ -2.01
RETP07949 AL390208.1-201ENST00000605885 644 ntBASIC2.48□□□□□ -2.01
RETP07949 MIR6895-201ENST00000613497 78 ntBASIC2.48□□□□□ -2.01
RETP07949 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.48□□□□□ -2.01
RETP07949 AC006927.4-201ENST00000639187 543 ntBASIC2.48□□□□□ -2.01
RETP07949 AL022578.1-201ENST00000439330 1433 ntBASIC2.48□□□□□ -2.01
RETP07949 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RETP07949 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RETP07949 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
RETP07949 ZNF876P-202ENST00000398732 1485 ntBASIC2.47□□□□□ -2.01
RETP07949 AL139276.1-201ENST00000311910 1001 ntBASIC2.47□□□□□ -2.01
RETP07949 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
RETP07949 RNU4-28P-201ENST00000364739 141 ntBASIC2.47□□□□□ -2.01
RETP07949 RNU1-91P-201ENST00000364746 163 ntBASIC2.47□□□□□ -2.01
RETP07949 RNU6-1122P-201ENST00000384449 107 ntBASIC2.47□□□□□ -2.01
RETP07949 RNA5SP210-201ENST00000391034 120 ntBASIC2.47□□□□□ -2.01
RETP07949 AL356131.1-201ENST00000405826 414 ntBASIC2.47□□□□□ -2.01
RETP07949 RPL22P18-201ENST00000417197 377 ntBASIC2.47□□□□□ -2.01
RETP07949 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.47□□□□□ -2.01
RETP07949 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RETP07949 OR4K11P-201ENST00000431829 904 ntBASIC2.47□□□□□ -2.01
RETP07949 AC092573.2-201ENST00000434546 243 ntBASIC2.47□□□□□ -2.01
RETP07949 NDUFB4P6-201ENST00000436819 366 ntBASIC2.47□□□□□ -2.01
RETP07949 MTND2P20-201ENST00000440805 661 ntBASIC2.47□□□□□ -2.01
RETP07949 AC104389.3-201ENST00000445629 235 ntBASIC2.47□□□□□ -2.01
RETP07949 RPL21P134-201ENST00000453468 483 ntBASIC2.47□□□□□ -2.01
RETP07949 BX322784.1-201ENST00000455793 1077 ntBASIC2.47□□□□□ -2.01
RETP07949 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.47□□□□□ -2.01
RETP07949 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.47□□□□□ -2.01
RETP07949 RPL23AP42-201ENST00000471152 471 ntBASIC2.47□□□□□ -2.01
RETP07949 RPL23AP45-201ENST00000476406 468 ntBASIC2.47□□□□□ -2.01
RETP07949 AC109464.2-201ENST00000510242 943 ntBASIC2.47□□□□□ -2.01
RETP07949 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.47□□□□□ -2.01
RETP07949 AC109445.1-201ENST00000512356 383 ntBASIC2.47□□□□□ -2.01
RETP07949 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.47□□□□□ -2.01
RETP07949 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.47□□□□□ -2.01
RETP07949 AP000867.2-201ENST00000532468 320 ntBASIC2.47□□□□□ -2.01
RETP07949 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RETP07949 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.47□□□□□ -2.01
RETP07949 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.47□□□□□ -2.01
RETP07949 RPL23AP84-201ENST00000571193 464 ntBASIC2.47□□□□□ -2.01
RETP07949 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.47□□□□□ -2.01
RETP07949 AC009977.1-201ENST00000586015 570 ntBASIC2.47□□□□□ -2.01
RETP07949 AC061975.8-201ENST00000587058 721 ntBASIC2.47□□□□□ -2.01
RETP07949 AC234772.3-201ENST00000602277 528 ntBASIC2.47□□□□□ -2.01
RETP07949 AC025811.1-201ENST00000604312 472 ntBASIC2.47□□□□□ -2.01
RETP07949 AC097478.2-201ENST00000610572 514 ntBASIC2.47□□□□□ -2.01
RETP07949 AC092106.3-201ENST00000611308 722 ntBASIC2.47□□□□□ -2.01
RETP07949 AP002782.1-201ENST00000623107 614 ntBASIC2.47□□□□□ -2.01
RETP07949 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.47□□□□□ -2.01
RETP07949 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RETP07949 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.46□□□□□ -2.01
RETP07949 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RETP07949 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.46□□□□□ -2.02
RETP07949 RNU6-621P-201ENST00000364752 109 ntBASIC2.46□□□□□ -2.02
RETP07949 Y_RNA.338-201ENST00000365320 114 ntBASIC2.46□□□□□ -2.02
RETP07949 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
RETP07949 RNU6-952P-201ENST00000391164 108 ntBASIC2.46□□□□□ -2.02
RETP07949 AL079342.1-201ENST00000401460 267 ntBASIC2.46□□□□□ -2.02
RETP07949 USP9YP20-201ENST00000419224 558 ntBASIC2.46□□□□□ -2.02
RETP07949 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.46□□□□□ -2.02
RETP07949 BX119904.4-201ENST00000424402 301 ntBASIC2.46□□□□□ -2.02
RETP07949 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.46□□□□□ -2.02
RETP07949 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.46□□□□□ -2.02
RETP07949 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.46□□□□□ -2.02
RETP07949 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.46□□□□□ -2.02
RETP07949 SNRPGP6-201ENST00000451124 220 ntBASIC2.46□□□□□ -2.02
RETP07949 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.46□□□□□ -2.02
RETP07949 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.46□□□□□ -2.02
RETP07949 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.46□□□□□ -2.02
RETP07949 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.46□□□□□ -2.02
RETP07949 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.46□□□□□ -2.02
RETP07949 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.46□□□□□ -2.02
RETP07949 AC091951.3-201ENST00000504093 246 ntBASIC2.46□□□□□ -2.02
RETP07949 AC147055.4-201ENST00000504399 745 ntBASIC2.46□□□□□ -2.02
RETP07949 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.46□□□□□ -2.02
RETP07949 RN7SKP219-201ENST00000516825 296 ntBASIC2.46□□□□□ -2.02
RETP07949 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.46□□□□□ -2.02
RETP07949 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.46□□□□□ -2.02
RETP07949 AC023050.2-201ENST00000544968 387 ntBASIC2.46□□□□□ -2.02
RETP07949 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.46□□□□□ -2.02
RETP07949 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.46□□□□□ -2.02
RETP07949 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.46□□□□□ -2.02
RETP07949 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.46□□□□□ -2.02
RETP07949 AC022022.2-201ENST00000602989 360 ntBASIC2.46□□□□□ -2.02
RETP07949 AC013444.2-201ENST00000603317 787 ntBASIC2.46□□□□□ -2.02
RETP07949 AC107952.2-201ENST00000606048 486 ntBASIC2.46□□□□□ -2.02
RETP07949 AC080013.3-201ENST00000606839 578 ntBASIC2.46□□□□□ -2.02
RETP07949 AC131235.4-201ENST00000609288 620 ntBASIC2.46□□□□□ -2.02
RETP07949 AC063944.3-201ENST00000609969 533 ntBASIC2.46□□□□□ -2.02
RETP07949 AL590099.1-201ENST00000615276 138 ntBASIC2.46□□□□□ -2.02
RETP07949 AL136981.2-201ENST00000617319 734 ntBASIC2.46□□□□□ -2.02
RETP07949 AC011330.2-201ENST00000621680 635 ntBASIC2.46□□□□□ -2.02
RETP07949 AC231657.1-201ENST00000624313 397 ntBASIC2.46□□□□□ -2.02
RETP07949 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.46□□□□□ -2.02
RETP07949 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms