Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 TRIM60P18-201ENST00000441518 828 ntBASIC3.54□□□□□ -1.84
CD4P01730 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.54□□□□□ -1.84
CD4P01730 ELOCP23-201ENST00000452014 332 ntBASIC3.54□□□□□ -1.84
CD4P01730 RNA5SP269-201ENST00000459032 137 ntBASIC3.54□□□□□ -1.84
CD4P01730 snoU13.28-201ENST00000459235 104 ntBASIC3.54□□□□□ -1.84
CD4P01730 snoU109.1-201ENST00000459339 135 ntBASIC3.54□□□□□ -1.84
CD4P01730 AC010468.1-201ENST00000461022 817 ntBASIC3.54□□□□□ -1.84
CD4P01730 AC021205.2-201ENST00000480069 347 ntBASIC3.54□□□□□ -1.84
CD4P01730 MTND4LP22-201ENST00000508209 276 ntBASIC3.54□□□□□ -1.84
CD4P01730 AC010486.3-201ENST00000511602 785 ntBASIC3.54□□□□□ -1.84
CD4P01730 RNU6-928P-201ENST00000516876 104 ntBASIC3.54□□□□□ -1.84
CD4P01730 SNORA31.21-201ENST00000517180 77 ntBASIC3.54□□□□□ -1.84
CD4P01730 AC116312.1-201ENST00000606841 314 ntBASIC3.54□□□□□ -1.84
CD4P01730 AC100793.4-201ENST00000613683 429 ntBASIC3.54□□□□□ -1.84
CD4P01730 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.54□□□□□ -1.84
CD4P01730 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.54□□□□□ -1.84
CD4P01730 MIR3974-201ENST00000637126 96 ntBASIC3.54□□□□□ -1.84
CD4P01730 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.54□□□□□ -1.84
CD4P01730 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.54□□□□□ -1.84
CD4P01730 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CD4P01730 AC008669.1-201ENST00000565823 2178 ntBASIC3.53□□□□□ -1.84
CD4P01730 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.53□□□□□ -1.84
CD4P01730 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.53□□□□□ -1.84
CD4P01730 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CD4P01730 RNY4P16-201ENST00000364768 94 ntBASIC3.53□□□□□ -1.84
CD4P01730 RNU6-140P-201ENST00000384566 108 ntBASIC3.53□□□□□ -1.84
CD4P01730 RNU6-817P-201ENST00000391083 104 ntBASIC3.53□□□□□ -1.84
CD4P01730 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.53□□□□□ -1.84
CD4P01730 RNA5SP229-201ENST00000410809 99 ntBASIC3.53□□□□□ -1.84
CD4P01730 RPS15AP12-201ENST00000419498 388 ntBASIC3.53□□□□□ -1.84
CD4P01730 AC090960.1-201ENST00000421072 306 ntBASIC3.53□□□□□ -1.84
CD4P01730 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.53□□□□□ -1.84
CD4P01730 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.53□□□□□ -1.84
CD4P01730 FCF1P1-201ENST00000432690 571 ntBASIC3.53□□□□□ -1.84
CD4P01730 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.53□□□□□ -1.84
CD4P01730 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.53□□□□□ -1.84
CD4P01730 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.53□□□□□ -1.84
CD4P01730 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.53□□□□□ -1.84
CD4P01730 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.53□□□□□ -1.84
CD4P01730 AC068724.1-201ENST00000487100 792 ntBASIC3.53□□□□□ -1.84
CD4P01730 AC138853.1-201ENST00000503549 823 ntBASIC3.53□□□□□ -1.84
CD4P01730 ARL4AP2-201ENST00000507378 601 ntBASIC3.53□□□□□ -1.84
CD4P01730 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.53□□□□□ -1.84
CD4P01730 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.53□□□□□ -1.84
CD4P01730 SNORA31.3-201ENST00000516029 96 ntBASIC3.53□□□□□ -1.84
CD4P01730 Y_RNA.672-201ENST00000516289 104 ntBASIC3.53□□□□□ -1.84
CD4P01730 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.53□□□□□ -1.84
CD4P01730 RPL21P5-201ENST00000554662 472 ntBASIC3.53□□□□□ -1.84
CD4P01730 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.53□□□□□ -1.84
CD4P01730 H3F3AP1-201ENST00000559984 334 ntBASIC3.53□□□□□ -1.84
CD4P01730 AC010653.1-201ENST00000571108 881 ntBASIC3.53□□□□□ -1.84
CD4P01730 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.53□□□□□ -1.84
CD4P01730 Z94722.1-201ENST00000604328 474 ntBASIC3.53□□□□□ -1.84
CD4P01730 AC136601.2-201ENST00000604356 474 ntBASIC3.53□□□□□ -1.84
CD4P01730 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.53□□□□□ -1.84
CD4P01730 AC006338.1-201ENST00000618453 749 ntBASIC3.53□□□□□ -1.84
CD4P01730 AL021368.2-201ENST00000606125 5352 ntBASIC3.52□□□□□ -1.85
CD4P01730 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CD4P01730 HSPE1P11-201ENST00000339579 310 ntBASIC3.52□□□□□ -1.85
CD4P01730 RNU6-1167P-201ENST00000363227 94 ntBASIC3.52□□□□□ -1.85
CD4P01730 RNU6-511P-201ENST00000363496 107 ntBASIC3.52□□□□□ -1.85
CD4P01730 RNU6-270P-201ENST00000364131 105 ntBASIC3.52□□□□□ -1.85
CD4P01730 MIR184-201ENST00000384962 84 ntBASIC3.52□□□□□ -1.85
CD4P01730 RN7SKP220-201ENST00000410611 288 ntBASIC3.52□□□□□ -1.85
CD4P01730 RN7SKP284-201ENST00000411002 343 ntBASIC3.52□□□□□ -1.85
CD4P01730 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.52□□□□□ -1.85
CD4P01730 NPM1P11-201ENST00000417106 855 ntBASIC3.52□□□□□ -1.85
CD4P01730 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.52□□□□□ -1.85
CD4P01730 ARPC3P1-201ENST00000437218 533 ntBASIC3.52□□□□□ -1.85
CD4P01730 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.52□□□□□ -1.85
CD4P01730 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.52□□□□□ -1.85
CD4P01730 RNU6-953P-201ENST00000459154 107 ntBASIC3.52□□□□□ -1.85
CD4P01730 RNU7-23P-201ENST00000459465 62 ntBASIC3.52□□□□□ -1.85
CD4P01730 AC006483.1-201ENST00000487308 313 ntBASIC3.52□□□□□ -1.85
CD4P01730 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.52□□□□□ -1.85
CD4P01730 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.52□□□□□ -1.85
CD4P01730 AL845331.3-202ENST00000562856 261 ntBASIC3.52□□□□□ -1.85
CD4P01730 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.52□□□□□ -1.85
CD4P01730 MIR4425-201ENST00000580572 84 ntBASIC3.52□□□□□ -1.85
CD4P01730 MIR3162-201ENST00000581818 82 ntBASIC3.52□□□□□ -1.85
CD4P01730 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.52□□□□□ -1.85
CD4P01730 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.52□□□□□ -1.85
CD4P01730 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.52□□□□□ -1.85
CD4P01730 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.52□□□□□ -1.85
CD4P01730 NUTF2P8-201ENST00000604593 363 ntBASIC3.52□□□□□ -1.85
CD4P01730 OR2AS2P-201ENST00000606902 342 ntBASIC3.52□□□□□ -1.85
CD4P01730 AL391813.2-201ENST00000609113 322 ntBASIC3.52□□□□□ -1.85
CD4P01730 MIR622-201ENST00000638396 96 ntBASIC3.52□□□□□ -1.85
CD4P01730 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CD4P01730 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CD4P01730 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CD4P01730 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.52□□□□□ -1.85
CD4P01730 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.52□□□□□ -1.85
CD4P01730 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.51□□□□□ -1.85
CD4P01730 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.51□□□□□ -1.85
CD4P01730 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CD4P01730 OR5J1P-201ENST00000313544 939 ntBASIC3.51□□□□□ -1.85
CD4P01730 FGF7P2-201ENST00000332473 296 ntBASIC3.51□□□□□ -1.85
CD4P01730 MIR449A-201ENST00000362113 91 ntBASIC3.51□□□□□ -1.85
CD4P01730 RNU1-105P-201ENST00000363470 161 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms