Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC092125.1-201ENST00000562568 1995 ntBASIC2.94□□□□□ -1.94
PDGFBP01127 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.93□□□□□ -1.94
PDGFBP01127 AL138713.1-201ENST00000624026 2130 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PDGFBP01127 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PDGFBP01127 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
PDGFBP01127 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PDGFBP01127 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.93□□□□□ -1.94
PDGFBP01127 U8.14-201ENST00000390843 143 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 RNU6-55P-201ENST00000411092 107 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 RNU6-954P-201ENST00000411355 107 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.93□□□□□ -1.94
PDGFBP01127 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.93□□□□□ -1.94
PDGFBP01127 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.93□□□□□ -1.94
PDGFBP01127 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.93□□□□□ -1.94
PDGFBP01127 AL603825.1-201ENST00000438481 80 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.93□□□□□ -1.94
PDGFBP01127 IFNA11P-201ENST00000446352 526 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.93□□□□□ -1.94
PDGFBP01127 AC087588.1-201ENST00000462203 316 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 AC034222.1-201ENST00000494052 532 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 AC106872.3-201ENST00000495104 446 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 RPS29P21-201ENST00000496272 170 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 AC093809.1-201ENST00000509155 340 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.93□□□□□ -1.94
PDGFBP01127 SNORA31.26-201ENST00000517250 137 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.93□□□□□ -1.94
PDGFBP01127 AP001646.1-201ENST00000527936 915 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 AC007834.2-201ENST00000536310 343 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.93□□□□□ -1.94
PDGFBP01127 AL133271.1-201ENST00000538229 291 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 ROCK1P1-201ENST00000573767 549 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 AC060771.1-201ENST00000582031 164 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 AC019226.1-201ENST00000625666 515 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 PABPC1P9-201ENST00000426076 1612 ntBASIC2.93□□□□□ -1.94
PDGFBP01127 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PDGFBP01127 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.92□□□□□ -1.94
PDGFBP01127 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
PDGFBP01127 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PDGFBP01127 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
PDGFBP01127 ZNF658B-202ENST00000615961 3375 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.92□□□□□ -1.94
PDGFBP01127 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
PDGFBP01127 RNU6-553P-201ENST00000364047 96 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 RNU6-270P-201ENST00000364131 105 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 Y_RNA.238-201ENST00000364441 102 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PDGFBP01127 RNU6-432P-201ENST00000384196 109 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 RNU6-809P-201ENST00000384461 107 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 MIR767-201ENST00000390228 109 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 RNU6-193P-201ENST00000410977 107 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.92□□□□□ -1.94
PDGFBP01127 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.92□□□□□ -1.94
PDGFBP01127 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.92□□□□□ -1.94
PDGFBP01127 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.92□□□□□ -1.94
PDGFBP01127 PIGFP3-201ENST00000441918 722 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 FAM103A2P-201ENST00000444122 354 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.92□□□□□ -1.94
PDGFBP01127 NIPA2P5-201ENST00000452282 464 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 snoU13.23-201ENST00000458863 104 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 RPS27P29-201ENST00000463110 252 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 AC010401.1-201ENST00000463867 348 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.92□□□□□ -1.94
PDGFBP01127 AC090888.1-201ENST00000561335 1141 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 AC136618.2-201ENST00000575091 400 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 AC025754.2-201ENST00000606491 432 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.92□□□□□ -1.94
PDGFBP01127 AC004223.4-201ENST00000612426 332 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.92□□□□□ -1.94
PDGFBP01127 AC079248.2-201ENST00000623779 326 ntBASIC2.92□□□□□ -1.94
PDGFBP01127 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PDGFBP01127 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PDGFBP01127 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDGFBP01127 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.91□□□□□ -1.94
PDGFBP01127 AC096644.4-201ENST00000563417 2912 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 AL445523.1-201ENST00000451184 1362 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.91□□□□□ -1.94
PDGFBP01127 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PDGFBP01127 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
PDGFBP01127 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
PDGFBP01127 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.91□□□□□ -1.94
PDGFBP01127 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 AC009963.1-201ENST00000417265 157 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 AC099548.1-201ENST00000421443 426 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.91□□□□□ -1.94
PDGFBP01127 AC092047.1-201ENST00000424997 240 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 AL365496.1-201ENST00000426885 215 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.91□□□□□ -1.94
PDGFBP01127 UBE2FP3-201ENST00000436366 524 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 HMGB3P12-201ENST00000438745 556 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 AL445567.1-201ENST00000439121 144 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 AL714022.1-201ENST00000439897 151 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 BNIP3P2-201ENST00000441221 577 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 Z96811.1-201ENST00000445880 108 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 EPS15P1-201ENST00000448836 336 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 AL162389.1-201ENST00000449233 177 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.91□□□□□ -1.94
PDGFBP01127 KATNBL1P6-201ENST00000453433 915 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 MTCO1P42-201ENST00000457379 726 ntBASIC2.91□□□□□ -1.94
PDGFBP01127 RN7SL442P-201ENST00000473804 320 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 157 ms