Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC009268.2-201ENST00000621925 457 ntBASIC2.1□□□□□ -2.07
VAPBO95292 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.1□□□□□ -2.07
VAPBO95292 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.1□□□□□ -2.07
VAPBO95292 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.1□□□□□ -2.07
VAPBO95292 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.1□□□□□ -2.07
VAPBO95292 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
VAPBO95292 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
VAPBO95292 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.09□□□□□ -2.07
VAPBO95292 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VAPBO95292 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
VAPBO95292 RNU6-359P-201ENST00000365466 108 ntBASIC2.09□□□□□ -2.07
VAPBO95292 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.09□□□□□ -2.07
VAPBO95292 SNORA6-201ENST00000384033 151 ntBASIC2.09□□□□□ -2.07
VAPBO95292 RPL23AP29-201ENST00000397284 453 ntBASIC2.09□□□□□ -2.07
VAPBO95292 RNU6-1328P-201ENST00000410938 106 ntBASIC2.09□□□□□ -2.07
VAPBO95292 USP9YP19-201ENST00000412165 485 ntBASIC2.09□□□□□ -2.07
VAPBO95292 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VAPBO95292 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.09□□□□□ -2.07
VAPBO95292 USP9YP13-201ENST00000417797 480 ntBASIC2.09□□□□□ -2.07
VAPBO95292 EIF4EP4-201ENST00000424916 578 ntBASIC2.09□□□□□ -2.07
VAPBO95292 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.09□□□□□ -2.07
VAPBO95292 AC236972.1-201ENST00000433225 199 ntBASIC2.09□□□□□ -2.07
VAPBO95292 PGBD4P3-201ENST00000440731 581 ntBASIC2.09□□□□□ -2.07
VAPBO95292 MTCYBP42-201ENST00000444653 1130 ntBASIC2.09□□□□□ -2.07
VAPBO95292 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.09□□□□□ -2.07
VAPBO95292 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.09□□□□□ -2.07
VAPBO95292 MTND1P9-201ENST00000453775 944 ntBASIC2.09□□□□□ -2.07
VAPBO95292 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.09□□□□□ -2.07
VAPBO95292 AC008628.1-201ENST00000508663 265 ntBASIC2.09□□□□□ -2.07
VAPBO95292 MTCYBP16-201ENST00000509187 1129 ntBASIC2.09□□□□□ -2.07
VAPBO95292 RNU6-583P-201ENST00000516012 92 ntBASIC2.09□□□□□ -2.07
VAPBO95292 NDUFS5P6-201ENST00000529136 295 ntBASIC2.09□□□□□ -2.07
VAPBO95292 MIR5571-201ENST00000577998 113 ntBASIC2.09□□□□□ -2.07
VAPBO95292 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.09□□□□□ -2.07
VAPBO95292 MTATP6P2-201ENST00000603319 678 ntBASIC2.09□□□□□ -2.07
VAPBO95292 AP000403.1-201ENST00000603349 851 ntBASIC2.09□□□□□ -2.07
VAPBO95292 AC069304.2-201ENST00000605154 435 ntBASIC2.09□□□□□ -2.07
VAPBO95292 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VAPBO95292 AC120053.1-201ENST00000607706 736 ntBASIC2.09□□□□□ -2.07
VAPBO95292 AL512506.1-201ENST00000613918 449 ntBASIC2.09□□□□□ -2.07
VAPBO95292 AC010133.1-201ENST00000615809 842 ntBASIC2.09□□□□□ -2.07
VAPBO95292 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.09□□□□□ -2.07
VAPBO95292 AC010889.1-201ENST00000566193 2666 ntBASIC2.08□□□□□ -2.08
VAPBO95292 RNU1-39P-201ENST00000383897 165 ntBASIC2.08□□□□□ -2.08
VAPBO95292 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VAPBO95292 CYCSP48-201ENST00000417124 323 ntBASIC2.08□□□□□ -2.08
VAPBO95292 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.08□□□□□ -2.08
VAPBO95292 AL451054.2-201ENST00000420896 202 ntBASIC2.08□□□□□ -2.08
VAPBO95292 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.08□□□□□ -2.08
VAPBO95292 ZYG11AP1-201ENST00000430329 837 ntBASIC2.08□□□□□ -2.08
VAPBO95292 GTF2IP7-202ENST00000436677 309 ntBASIC2.08□□□□□ -2.08
VAPBO95292 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VAPBO95292 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.08□□□□□ -2.08
VAPBO95292 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.08□□□□□ -2.08
VAPBO95292 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.08□□□□□ -2.08
VAPBO95292 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
VAPBO95292 AL160314.1-201ENST00000490836 438 ntBASIC2.08□□□□□ -2.08
VAPBO95292 RNU6-1225P-201ENST00000516336 65 ntBASIC2.08□□□□□ -2.08
VAPBO95292 RNU1-40P-201ENST00000516816 164 ntBASIC2.08□□□□□ -2.08
VAPBO95292 RNU1-97P-201ENST00000516872 164 ntBASIC2.08□□□□□ -2.08
VAPBO95292 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.08□□□□□ -2.08
VAPBO95292 AC010186.2-204ENST00000537668 439 ntBASIC2.08□□□□□ -2.08
VAPBO95292 AC087894.1-201ENST00000538359 518 ntBASIC2.08□□□□□ -2.08
VAPBO95292 AL359212.1-201ENST00000556608 614 ntBASIC2.08□□□□□ -2.08
VAPBO95292 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.08□□□□□ -2.08
VAPBO95292 AC007151.1-201ENST00000572774 483 ntBASIC2.08□□□□□ -2.08
VAPBO95292 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.08□□□□□ -2.08
VAPBO95292 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.08□□□□□ -2.08
VAPBO95292 AC004987.4-201ENST00000603383 338 ntBASIC2.08□□□□□ -2.08
VAPBO95292 AL357094.1-201ENST00000603845 844 ntBASIC2.08□□□□□ -2.08
VAPBO95292 AL021997.1-201ENST00000605757 193 ntBASIC2.08□□□□□ -2.08
VAPBO95292 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.08□□□□□ -2.08
VAPBO95292 AL138478.1-201ENST00000612252 832 ntBASIC2.08□□□□□ -2.08
VAPBO95292 AC010378.1-201ENST00000619270 362 ntBASIC2.08□□□□□ -2.08
VAPBO95292 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.08□□□□□ -2.08
VAPBO95292 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.08□□□□□ -2.08
VAPBO95292 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
VAPBO95292 AP005901.5-201ENST00000545779 1796 ntBASIC2.08□□□□□ -2.08
VAPBO95292 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VAPBO95292 AL161781.1-201ENST00000354277 403 ntBASIC2.07□□□□□ -2.08
VAPBO95292 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VAPBO95292 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.07□□□□□ -2.08
VAPBO95292 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
VAPBO95292 MIR218-1-201ENST00000384999 110 ntBASIC2.07□□□□□ -2.08
VAPBO95292 TXNP7-201ENST00000406296 293 ntBASIC2.07□□□□□ -2.08
VAPBO95292 RNU6-516P-201ENST00000411381 104 ntBASIC2.07□□□□□ -2.08
VAPBO95292 AC007435.1-201ENST00000421086 415 ntBASIC2.07□□□□□ -2.08
VAPBO95292 MRPS36P1-201ENST00000421291 307 ntBASIC2.07□□□□□ -2.08
VAPBO95292 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.07□□□□□ -2.08
VAPBO95292 SRIP2-201ENST00000428470 166 ntBASIC2.07□□□□□ -2.08
VAPBO95292 AL356320.1-201ENST00000429616 163 ntBASIC2.07□□□□□ -2.08
VAPBO95292 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.07□□□□□ -2.08
VAPBO95292 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
VAPBO95292 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.07□□□□□ -2.08
VAPBO95292 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.07□□□□□ -2.08
VAPBO95292 AL121769.1-201ENST00000469473 401 ntBASIC2.07□□□□□ -2.08
VAPBO95292 AC104090.1-201ENST00000506341 1171 ntBASIC2.07□□□□□ -2.08
VAPBO95292 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.07□□□□□ -2.08
VAPBO95292 AC008413.1-201ENST00000511864 177 ntBASIC2.07□□□□□ -2.08
VAPBO95292 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms