Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.19□□□□□ -1.9
NKX2-2O95096 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-2O95096 FABP5P15-201ENST00000453566 214 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 RPL37P6-201ENST00000460682 294 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 MRPS17P3-201ENST00000465453 385 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.19□□□□□ -1.9
NKX2-2O95096 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.19□□□□□ -1.9
NKX2-2O95096 AC021205.2-201ENST00000480069 347 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 RNA5SP290-201ENST00000517133 127 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 OR5BN1P-201ENST00000532955 829 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 AP003034.1-201ENST00000534621 422 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 AC011602.1-201ENST00000546484 331 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.19□□□□□ -1.9
NKX2-2O95096 AC025449.1-201ENST00000603896 529 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 AC017083.3-201ENST00000609955 700 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 AL391261.4-201ENST00000616012 481 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 AL158209.2-201ENST00000619266 216 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 XIST_intron.1-201ENST00000619444 68 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NKX2-2O95096 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.19□□□□□ -1.9
NKX2-2O95096 AC091152.2-201ENST00000591628 2569 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.19□□□□□ -1.9
NKX2-2O95096 FAM35BP-202ENST00000497389 3337 ntBASIC3.19□□□□□ -1.9
NKX2-2O95096 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-2O95096 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
NKX2-2O95096 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-2O95096 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-2O95096 AL356274.2-201ENST00000624379 3752 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-2O95096 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-2O95096 RNU6-270P-201ENST00000364131 105 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 RNU4-48P-201ENST00000365559 182 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NKX2-2O95096 Y_RNA.505-201ENST00000384489 102 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 RNU6-606P-201ENST00000384721 111 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 SNORD17-201ENST00000390930 237 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 RPS4XP8-201ENST00000402039 771 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 RNU6-387P-201ENST00000411331 105 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 ZNF863P-201ENST00000426746 417 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-2O95096 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-2O95096 AC073063.1-201ENST00000434352 607 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-2O95096 PSPHP1-201ENST00000450062 261 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 MRPS31P2-201ENST00000451581 518 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 RPL23AP67-201ENST00000465341 474 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 RPS3AP14-201ENST00000483907 780 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 SNORA31.1-201ENST00000515993 133 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 SNORA31.5-201ENST00000516190 133 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 MTCYBP20-201ENST00000524239 1129 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-2O95096 OR4R1P-201ENST00000529879 463 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 OR5B10P-201ENST00000532869 642 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 AC034105.4-201ENST00000568304 277 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 MIR4644-201ENST00000579929 84 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-2O95096 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-2O95096 AC006557.5-201ENST00000603126 811 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.18□□□□□ -1.9
NKX2-2O95096 MIR6798-201ENST00000612887 67 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 AC025034.2-201ENST00000623264 286 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.18□□□□□ -1.9
NKX2-2O95096 MIR6863-201ENST00000636112 90 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 U6.98-201ENST00000637157 84 ntBASIC3.18□□□□□ -1.9
NKX2-2O95096 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NKX2-2O95096 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NKX2-2O95096 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.17□□□□□ -1.9
NKX2-2O95096 AC103710.2-202ENST00000641454 2853 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 MIR30E-201ENST00000362104 92 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 RNU6-288P-201ENST00000363690 104 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 RNU6-512P-201ENST00000364438 103 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 RNU6-1215P-201ENST00000384441 102 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 Y_RNA.534-201ENST00000384599 112 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 RNU6-192P-201ENST00000391253 100 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 MTCO3P40-201ENST00000392516 676 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NKX2-2O95096 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-2O95096 AC017083.1-201ENST00000428093 483 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-2O95096 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.17□□□□□ -1.9
NKX2-2O95096 AL591212.2-201ENST00000433923 257 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-2O95096 AC122718.1-201ENST00000439448 744 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 HMGB3P11-201ENST00000440127 604 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 MTND4P25-201ENST00000441039 533 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 AC008264.1-201ENST00000447612 367 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 AC093899.1-201ENST00000457984 376 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 FAM133DP-201ENST00000464802 691 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 RPL9P33-201ENST00000484311 566 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 RPL7P47-201ENST00000497299 556 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 RNU6-506P-201ENST00000516553 94 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 AC107934.2-201ENST00000518653 310 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 AP001893.2-201ENST00000526949 202 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.17□□□□□ -1.9
NKX2-2O95096 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.17□□□□□ -1.9
NKX2-2O95096 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.17□□□□□ -1.9
NKX2-2O95096 MIR4775-201ENST00000581168 75 ntBASIC3.17□□□□□ -1.9
NKX2-2O95096 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
NKX2-2O95096 AC068790.6-201ENST00000602558 258 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 168.1 ms