Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RCCD1A6NED2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.7□□□□□ -1.5
RCCD1A6NED2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.7□□□□□ -1.5
RCCD1A6NED2 SNORD116-26-201ENST00000516006 96 ntBASIC5.7□□□□□ -1.5
RCCD1A6NED2 RNU6-919P-201ENST00000516731 104 ntBASIC5.7□□□□□ -1.5
RCCD1A6NED2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.7□□□□□ -1.5
RCCD1A6NED2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.7□□□□□ -1.5
RCCD1A6NED2 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.7□□□□□ -1.5
RCCD1A6NED2 AC012616.1-201ENST00000600294 197 ntBASIC5.7□□□□□ -1.5
RCCD1A6NED2 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC5.7□□□□□ -1.5
RCCD1A6NED2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.7□□□□□ -1.5
RCCD1A6NED2 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RCCD1A6NED2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RCCD1A6NED2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RCCD1A6NED2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.7□□□□□ -1.5
RCCD1A6NED2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RCCD1A6NED2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RCCD1A6NED2 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.69□□□□□ -1.5
RCCD1A6NED2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.69□□□□□ -1.5
RCCD1A6NED2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
RCCD1A6NED2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 LINC01963-201ENST00000562038 3148 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 AL360270.2-201ENST00000562952 5985 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 Y_RNA.7-201ENST00000362352 102 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 RNU6-961P-201ENST00000363893 105 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 RNU1-146P-201ENST00000364015 165 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 RNU4-84P-201ENST00000364200 139 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 RNU6-281P-201ENST00000384212 103 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RCCD1A6NED2 Z85995.1-201ENST00000415547 335 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.69□□□□□ -1.5
RCCD1A6NED2 AC009237.7-201ENST00000447357 229 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 RPL23AP3-201ENST00000453844 468 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 ACA64.1-201ENST00000459171 127 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 AF186996.7-201ENST00000492781 209 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.69□□□□□ -1.5
RCCD1A6NED2 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.69□□□□□ -1.5
RCCD1A6NED2 AC024940.3-201ENST00000538551 316 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.69□□□□□ -1.5
RCCD1A6NED2 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 MIR5695-201ENST00000579717 85 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 AC005176.2-201ENST00000596933 147 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.69□□□□□ -1.5
RCCD1A6NED2 AL359881.1-201ENST00000602916 267 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 Y_RNA.778-201ENST00000620203 90 ntBASIC5.69□□□□□ -1.5
RCCD1A6NED2 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RCCD1A6NED2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RCCD1A6NED2 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RCCD1A6NED2 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RCCD1A6NED2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 RNU6-249P-201ENST00000363016 102 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 RNU1-19P-201ENST00000363306 165 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 RNU6-527P-201ENST00000363425 104 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 RNU6-211P-201ENST00000384047 107 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 MIR10B-201ENST00000385011 110 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 SRSF1P1-201ENST00000424058 520 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 AC022795.1-201ENST00000473808 480 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 RPS4XP22-201ENST00000480755 780 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 RPL31P13-201ENST00000484151 370 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 AC139453.3-201ENST00000493276 369 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 HMGB3P3-201ENST00000510526 400 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 AL391261.3-201ENST00000557194 520 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 TGIF1P1-201ENST00000558095 802 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 AC069307.1-201ENST00000602820 447 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 AC023043.4-201ENST00000612081 449 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 AC099669.2-201ENST00000616549 437 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 AC241585.2-209ENST00000638217 143 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RCCD1A6NED2 AC107027.3-201ENST00000565095 3473 ntBASIC5.68□□□□□ -1.5
RCCD1A6NED2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RCCD1A6NED2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RCCD1A6NED2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RCCD1A6NED2 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.68□□□□□ -1.5
RCCD1A6NED2 ZNF204P-201ENST00000416749 2397 ntBASIC5.67□□□□□ -1.5
RCCD1A6NED2 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms