Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 PRPS1P1-201ENST00000445305 876 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 AL121877.1-201ENST00000453704 622 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 FGF7P3-201ENST00000454645 303 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 RNA5SP310-201ENST00000459084 116 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 DYNLL1P5-201ENST00000467158 270 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 DEFB109F-201ENST00000491870 277 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 HIGD1AP13-201ENST00000509878 289 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 TBCAP3-201ENST00000512475 312 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 AC112206.3-201ENST00000514578 389 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 RNU2-69P-201ENST00000516061 100 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 RNU6-189P-201ENST00000516120 101 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 AC087241.2-201ENST00000535801 324 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 VN1R80P-201ENST00000597126 338 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 DUSP12P1-201ENST00000612874 516 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 AC022306.2-201ENST00000617563 647 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 SNORD39.4-201ENST00000620099 78 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 AL049641.1-201ENST00000441055 1948 ntBASIC3.62□□□□□ -1.83
MBD3L4A6NDZ8 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 RNU6-845P-201ENST00000362578 103 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 FAT1P1-201ENST00000406588 507 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AL591034.1-201ENST00000407447 340 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 RNU6-1148P-201ENST00000410992 104 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AL645937.1-202ENST00000421799 937 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 ZNF863P-201ENST00000426746 417 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AL358472.1-201ENST00000431295 329 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AL135752.1-201ENST00000479477 471 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 RPL21P93-201ENST00000480465 489 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AC009901.1-201ENST00000506703 541 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 VWA8P1-201ENST00000510889 176 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AC008549.1-201ENST00000512900 643 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AC104136.1-201ENST00000512969 394 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 RNA5SP165-201ENST00000517142 115 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AC022690.1-201ENST00000526681 550 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 OR11H5P-201ENST00000554039 926 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 PSMA3P-201ENST00000555485 635 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AC120057.2-201ENST00000571520 271 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AC025627.2-201ENST00000576220 160 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 Z82243.1-201ENST00000609432 473 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 MIR6868-201ENST00000611215 58 ntBASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MBD3L4A6NDZ8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC090740.1-201ENST00000623193 2262 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 FAM35BP-202ENST00000497389 3337 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 SNORA71.3-201ENST00000362582 128 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 Y_RNA.33-201ENST00000362591 102 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 RNU6-395P-201ENST00000365662 106 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 Y_RNA.530-201ENST00000384587 101 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 MIR578-201ENST00000384828 96 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 MIR200C-201ENST00000384980 68 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 SNORA11.1-201ENST00000408133 129 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 RNU6-1025P-201ENST00000410629 104 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AL158156.1-201ENST00000422509 473 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 HMGB3P11-201ENST00000440127 604 ntBASIC3.6□□□□□ -1.83
MBD3L4A6NDZ8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms