Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 Y_RNA.105-201ENST00000363182 111 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RNU6-371P-201ENST00000364283 108 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RNU4-50P-201ENST00000364361 141 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 Y_RNA.785-201ENST00000384290 109 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 Y_RNA.471-201ENST00000384312 102 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RNU6-14P-201ENST00000384630 106 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AL590704.1-201ENST00000402856 794 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RN7SKP27-201ENST00000410684 333 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RPL21P38-201ENST00000418090 167 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AL391219.1-201ENST00000422570 483 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 FCF1P4-201ENST00000448326 183 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AL139109.1-201ENST00000455491 297 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RPL21P41-201ENST00000459863 264 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RPL7AP28-201ENST00000464513 571 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AC098869.1-201ENST00000481627 292 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AC015795.1-201ENST00000513669 327 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RN7SKP46-201ENST00000515942 234 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AC027287.1-201ENST00000553115 1453 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AC067852.3-201ENST00000589177 561 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RPS29P30-201ENST00000600975 111 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AL160281.1-201ENST00000605307 311 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 AC009951.1-201ENST00000623674 2614 ntBASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.59□□□□□ -1.67
SNX11Q9Y5W9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SNX11Q9Y5W9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
SNX11Q9Y5W9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SNX11Q9Y5W9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AL359893.1-201ENST00000447628 1580 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AC021146.4-201ENST00000309229 279 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 Y_RNA.416-201ENST00000384014 113 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 Y_RNA.480-201ENST00000384364 102 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 Y_RNA.526-201ENST00000384572 110 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 MIR625-201ENST00000385047 85 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 HSPE1P8-201ENST00000406997 288 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 RNU6-603P-201ENST00000411403 107 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AL030996.1-201ENST00000411430 235 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 BX842559.1-201ENST00000419615 532 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AL392103.1-201ENST00000447000 198 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 BX276092.4-201ENST00000452056 248 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 HMGB1P25-201ENST00000468402 607 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 HIGD1AP3-201ENST00000515857 278 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 Y_RNA.687-201ENST00000516558 91 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 RN7SKP277-201ENST00000516895 283 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 RNU6-352P-201ENST00000516908 107 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AC134698.5-201ENST00000519444 336 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AC130289.1-201ENST00000577321 73 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AC006272.2-201ENST00000594725 163 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 RNF138P2-201ENST00000603490 592 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AC116447.1-201ENST00000613153 453 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AC015813.6-201ENST00000624409 5808 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AC116667.1-201ENST00000604855 2072 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 ZFRP1-201ENST00000457579 2970 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 AP000756.2-201ENST00000624168 2567 ntBASIC4.58□□□□□ -1.68
SNX11Q9Y5W9 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.57□□□□□ -1.68
SNX11Q9Y5W9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX11Q9Y5W9 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX11Q9Y5W9 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SNX11Q9Y5W9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.57□□□□□ -1.68
SNX11Q9Y5W9 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SNX11Q9Y5W9 Y_RNA.20-201ENST00000362479 113 ntBASIC4.57□□□□□ -1.68
SNX11Q9Y5W9 Y_RNA.180-201ENST00000363867 113 ntBASIC4.57□□□□□ -1.68
SNX11Q9Y5W9 Y_RNA.270-201ENST00000364693 104 ntBASIC4.57□□□□□ -1.68
SNX11Q9Y5W9 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.57□□□□□ -1.68
SNX11Q9Y5W9 Y_RNA.539-201ENST00000384635 107 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms