Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 HMGN1P12-201ENST00000499125 195 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC091951.2-201ENST00000500762 203 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AL359273.1-201ENST00000510918 627 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-927P-201ENST00000516199 100 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-875P-201ENST00000516488 106 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-677P-201ENST00000516914 101 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 RANP3-201ENST00000530970 276 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 ADI1P3-201ENST00000549509 470 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC091135.1-201ENST00000585943 307 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC020910.2-201ENST00000603635 610 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-89P-201ENST00000606519 100 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC063943.3-201ENST00000615562 356 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 MTND5P42-201ENST00000637720 498 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 TPTE2P4-201ENST00000258589 1605 ntBASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.98□□□□□ -1.77
PCDHA3Q9Y5H8 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 RNU4-20P-201ENST00000365601 151 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 SNORA70C-201ENST00000384538 135 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 RNU6-550P-201ENST00000391057 101 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 RPS26P8-201ENST00000393490 348 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AL356967.1-201ENST00000406305 431 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 Z98941.1-201ENST00000407764 100 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 MIR1290-201ENST00000408735 78 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 RHEBP3-201ENST00000411920 351 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 RPL27AP8-201ENST00000424277 446 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 ERLEC1P1-201ENST00000433806 578 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 SNRPEP8-201ENST00000442866 260 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 ELOCP23-201ENST00000452014 332 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AC087588.1-201ENST00000462203 316 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 RBBP4P6-201ENST00000508098 202 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 LRRC34P2-201ENST00000514850 553 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AL137161.1-201ENST00000532231 390 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AC078814.3-201ENST00000553036 491 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AC011712.1-201ENST00000588959 234 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 DPPA3P3-201ENST00000603842 430 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 SNORA62.6-201ENST00000606322 83 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AP002826.1-201ENST00000608835 315 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AL359547.2-201ENST00000615810 418 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AL713922.2-201ENST00000619384 716 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AC099654.5-201ENST00000636479 350 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 AC106871.1-201ENST00000568324 3102 ntBASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PCDHA3Q9Y5H8 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 RNA5SP97-201ENST00000365006 84 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AL022722.2-201ENST00000402519 180 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AL391417.1-201ENST00000404100 426 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 RNU2-41P-201ENST00000410991 178 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 ARL5AP1-201ENST00000418991 388 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 NDUFB4P7-201ENST00000423198 363 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AC004975.1-201ENST00000428733 208 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 HMGN2P26-201ENST00000463169 339 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 RPL21P8-201ENST00000465083 535 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 FTH1P2-201ENST00000466086 412 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AC008549.1-201ENST00000512900 643 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 SCARNA15.2-201ENST00000516409 127 ntBASIC3.96□□□□□ -1.78
PCDHA3Q9Y5H8 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms