Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC046134.1-201ENST00000514454 666 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AC004024.1-201ENST00000549244 247 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AC078814.3-201ENST00000553036 491 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 HSPE1P5-201ENST00000561489 272 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 UBE2V2P2-201ENST00000587677 504 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 BNIP3P22-201ENST00000593399 556 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-89P-201ENST00000606519 100 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AC090132.2-201ENST00000615881 347 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AL445363.3-201ENST00000623080 671 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 CBX3P1-201ENST00000325243 554 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 Y_RNA.279-201ENST00000364763 95 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-332P-201ENST00000391193 108 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AL590704.1-201ENST00000402856 794 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 RNA5SP36-201ENST00000410197 133 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 RN7SKP202-201ENST00000410439 330 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 EEF1A1P40-201ENST00000412883 573 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 BX842559.1-201ENST00000419615 532 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AP000852.1-201ENST00000472460 573 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 RN7SKP289-201ENST00000517244 295 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC053481.4-201ENST00000583164 216 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AL035413.2-201ENST00000604801 525 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AL354984.3-201ENST00000604803 325 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC110741.2-201ENST00000605278 268 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 HMGB1P50-201ENST00000605814 607 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 MIR92B-201ENST00000607575 96 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC009570.1-201ENST00000609599 745 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC093913.1-201ENST00000614178 329 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 AC099654.5-201ENST00000636479 350 ntBASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.06□□□□□ -1.76
PCDHGA3Q9Y5H0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 MTND4P12-201ENST00000498999 1377 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 HSPA8P1-201ENST00000425843 1833 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 RNA5SP130-201ENST00000364431 114 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AL359837.1-201ENST00000381357 287 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-1197P-201ENST00000391183 107 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-510P-201ENST00000391239 108 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 CISD1P1-201ENST00000393907 327 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AL583835.1-201ENST00000399570 407 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU2-33P-201ENST00000410344 192 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 Z85995.1-201ENST00000415547 335 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 RPL7P10-201ENST00000417407 739 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 BTF3L4P3-201ENST00000418879 476 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AL160275.3-201ENST00000423876 471 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AL162151.2-201ENST00000448875 158 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 RNA5SP246-201ENST00000458909 119 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AC007547.1-201ENST00000462177 490 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 RPL35AP15-201ENST00000468042 339 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 RPL30P5-201ENST00000494923 336 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AC114786.4-201ENST00000508771 728 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-914P-201ENST00000516749 109 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 MIR5692A1-201ENST00000580523 69 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AC098826.3-201ENST00000603823 466 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 AC007546.2-201ENST00000623996 360 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 MTND1P37-201ENST00000636562 264 ntBASIC4.05□□□□□ -1.76
PCDHGA3Q9Y5H0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms