Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 RN7SKP160-201ENST00000363804 340 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 RNU6-755P-201ENST00000364400 103 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 RNU5E-7P-201ENST00000365290 117 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 RNU6-281P-201ENST00000384212 103 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 MIR10B-201ENST00000385011 110 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 AC099336.2-201ENST00000422457 254 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 RPL23AP58-201ENST00000440453 469 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 CYCSP32-201ENST00000440548 321 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 AP000281.1-201ENST00000444036 316 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 AC099560.2-201ENST00000457554 255 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 RN7SL197P-201ENST00000466981 299 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 RPS4XP1-201ENST00000482189 787 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 BTF3L4P4-201ENST00000506381 449 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 BX510359.5-201ENST00000515651 304 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 Y_RNA.797-201ENST00000515977 94 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 NDUFB4P11-201ENST00000560510 395 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 AC009127.3-201ENST00000570531 403 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 MIR4489-201ENST00000578869 62 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 MIR5695-201ENST00000579717 85 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 MIR4431-201ENST00000579990 94 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 MIR4260-201ENST00000583107 67 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 AL645944.1-201ENST00000603857 493 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 SUMO2P15-201ENST00000604285 278 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 RN7SL544P-201ENST00000617232 284 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 RN7SL763P-201ENST00000620922 284 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 AC010266.2-201ENST00000564741 3255 ntBASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PCDHB3Q9Y5E6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AC005332.5-201ENST00000591222 2919 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 RNU6-1286P-201ENST00000383871 107 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 RNU6-1145P-201ENST00000384246 107 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 RNU6-541P-201ENST00000384709 110 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 MIR329-1-201ENST00000385028 80 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 MIR1250-201ENST00000408098 113 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 RAB9AP3-201ENST00000412737 573 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 CYCSP6-201ENST00000434498 302 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AL663074.2-201ENST00000440621 479 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 RAB9AP1-201ENST00000449393 573 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AC006539.1-201ENST00000481419 501 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AF186996.7-201ENST00000492781 209 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 MIR2117-201ENST00000516780 80 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 Y_RNA.709-201ENST00000516952 92 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 RNA5SP165-201ENST00000517142 115 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 TXNP4-201ENST00000575018 310 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 MIR3145-201ENST00000580727 82 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AC211433.2-201ENST00000608433 387 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 MIR4496-201ENST00000635896 61 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AL596275.2-206ENST00000641957 626 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 AC026523.2-201ENST00000625039 7739 ntBASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PCDHB3Q9Y5E6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 AC107027.3-201ENST00000565095 3473 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 RNU6-1249P-201ENST00000363237 111 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 Y_RNA.309-201ENST00000365046 111 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 RNU6-476P-201ENST00000384726 107 ntBASIC5.56□□□□□ -1.52
PCDHB3Q9Y5E6 MIR1178-201ENST00000408396 91 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms