Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
ZC3H4Q9UPT8 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AL360270.2-201ENST00000562952 5985 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.20-201ENST00000362479 113 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.54-201ENST00000362766 105 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.105-201ENST00000363182 111 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 RNU6-280P-201ENST00000364145 104 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 RNA5SP241-201ENST00000391326 114 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 RNA5SP56-201ENST00000410277 118 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 RN7SKP267-201ENST00000410381 285 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 RNU2-71P-201ENST00000411395 189 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AC007098.1-201ENST00000420122 367 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 MYL8P-204ENST00000431574 518 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 ELOCP18-201ENST00000434209 337 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 PHBP16-201ENST00000446318 950 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 PRDX3P3-201ENST00000447765 522 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 NUTF2P3-201ENST00000448540 384 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 RNU6-914P-201ENST00000516749 109 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AC087369.1-201ENST00000520775 996 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 MIR3158-1-201ENST00000583596 81 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AP005019.3-201ENST00000620418 560 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 MIR6075-201ENST00000620782 95 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AC005183.1-201ENST00000603687 1979 ntBASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ZC3H4Q9UPT8 AL592182.3-201ENST00000642132 3304 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.29-201ENST00000362570 113 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 SNORA69.1-201ENST00000390904 137 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AL590762.2-201ENST00000395798 571 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 SNORA11.1-201ENST00000408133 129 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 RNU2-43P-201ENST00000410306 190 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 COX5BP7-201ENST00000414780 274 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 TBCAP2-201ENST00000416175 326 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 UBE2D3P2-201ENST00000424409 445 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 COX6CP13-201ENST00000428703 226 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AC090774.1-201ENST00000435925 246 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AL121871.1-201ENST00000443413 436 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AC000111.2-201ENST00000448200 210 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 RPL37P6-202ENST00000464216 403 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 Y_RNA.700-201ENST00000516806 100 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AC022080.3-201ENST00000544433 482 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 TRAV32-201ENST00000553993 340 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AC130289.1-201ENST00000577321 73 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AL158827.2-201ENST00000602494 330 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AL355877.2-201ENST00000603670 358 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AC009779.6-201ENST00000603972 165 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AC010900.2-201ENST00000604508 210 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AL121917.1-203ENST00000605534 577 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 MIR6839-201ENST00000620425 113 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AL023881.1-201ENST00000621088 301 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 AL691447.3-201ENST00000635020 330 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 MIR492-201ENST00000638676 116 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 ZFRP1-201ENST00000457579 2970 ntBASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ZC3H4Q9UPT8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.48
ZC3H4Q9UPT8 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 EOGT-210ENST00000615922 1931 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 RNU1-13P-201ENST00000384499 162 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 PPIAP31-201ENST00000405422 495 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 RNU2-25P-201ENST00000411041 191 ntBASIC5.83□□□□□ -1.48
ZC3H4Q9UPT8 CTSL3P-202ENST00000412179 788 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms