Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 RNU6-412P-201ENST00000516434 106 ntBASIC5.74□□□□□ -1.49
LHX6Q9UPM6 IGLV3-6-201ENST00000523937 250 ntBASIC5.74□□□□□ -1.49
LHX6Q9UPM6 AC099669.2-201ENST00000616549 437 ntBASIC5.74□□□□□ -1.49
LHX6Q9UPM6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LHX6Q9UPM6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
LHX6Q9UPM6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.74□□□□□ -1.49
LHX6Q9UPM6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.74□□□□□ -1.49
LHX6Q9UPM6 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LHX6Q9UPM6 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
LHX6Q9UPM6 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 AL672167.1-205ENST00000641112 3080 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 AC009779.8-201ENST00000641684 4384 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 RNU6-766P-201ENST00000362478 107 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 Y_RNA.120-201ENST00000363304 110 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 AC005042.1-201ENST00000393397 800 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 RPL23AP17-201ENST00000401064 499 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 AL512604.1-201ENST00000404812 257 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 RNU6-603P-201ENST00000411403 107 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 RPS3AP1-201ENST00000413190 320 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 RPL35AP31-201ENST00000418340 337 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 CYCSP49-201ENST00000420810 319 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 OR2AM1P-201ENST00000422137 422 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 HSPE1P21-201ENST00000438283 308 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 IGHV5-78-201ENST00000450948 295 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 RPS29P22-201ENST00000472363 168 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 RN7SL97P-201ENST00000486780 299 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 AL049874.1-201ENST00000489560 388 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 AC107016.1-201ENST00000550463 337 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 RPL12P48-201ENST00000605620 304 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 MIR6837-201ENST00000620884 64 ntBASIC5.73□□□□□ -1.49
LHX6Q9UPM6 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
LHX6Q9UPM6 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 SELENOWP1-201ENST00000322792 252 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 U8.1-201ENST00000362843 134 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 RNU6-793P-201ENST00000384233 104 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 MIR514A1-201ENST00000385133 98 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 RPL21P17-201ENST00000397467 475 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 EDDM3CP-201ENST00000415977 425 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 FTH1P6-201ENST00000430768 320 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 AC245047.4-201ENST00000433189 144 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 RPS11P7-201ENST00000442125 465 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 snoU13.3-201ENST00000459441 104 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 RPS20P22-201ENST00000473700 357 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 AC021006.3-201ENST00000530771 192 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 MIR4646-201ENST00000580775 63 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 AC120024.3-201ENST00000603167 156 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 uc_338.18-201ENST00000615451 175 ntBASIC5.72□□□□□ -1.49
LHX6Q9UPM6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.72□□□□□ -1.49
LHX6Q9UPM6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
LHX6Q9UPM6 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.71□□□□□ -1.49
LHX6Q9UPM6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.71□□□□□ -1.49
LHX6Q9UPM6 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.71□□□□□ -1.49
LHX6Q9UPM6 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.71□□□□□ -1.5
LHX6Q9UPM6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LHX6Q9UPM6 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms